~ruther/guix-local

48983fab8d1d65a3e9fa5682e469a1c4f27dad4c — Sharlatan Hellseher 2 months ago 14ab247
gnu: python-mappy: Fix indentation.

* gnu/packages/bioinformatics.scm (python-mappy): Fix indentation.

Change-Id: Ib6fbe26b7ba54e559093699b6b31e9a27b60ea96
1 files changed, 23 insertions(+), 23 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +23 -23
@@ 18687,36 18687,36 @@ cases include:

(define-public python-mappy
  (package
   (name "python-mappy")
   (version "2.24")
   (source
    (origin
      (method git-fetch)
      (uri (git-reference
             (url "https://github.com/lh3/minimap2")
             (commit (string-append "v" version))))
      (file-name (git-file-name name version))
      (sha256
       (base32 "0k658659ivxk2xnyawrfqdhcji6a3xcqdr5a9r5myzb2ivypnjmh"))))
   (build-system pyproject-build-system)
    (name "python-mappy")
    (version "2.24")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
              (url "https://github.com/lh3/minimap2")
              (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32 "0k658659ivxk2xnyawrfqdhcji6a3xcqdr5a9r5myzb2ivypnjmh"))))
    (build-system pyproject-build-system)
    (arguments
     (list
      #:test-backend #~'custom
      #:test-flags
      #~(list "-c" (string-append "import mappy;"
                                 " print(mappy.revcomp("
                                 "mappy.Aligner('test/MT-human.fa')"
                                 ".seq('MT_human', 100, 200)))"))))
   (native-inputs
    (list python-cython python-setuptools))
   (inputs
    (list zlib))
   (home-page "https://github.com/lh3/minimap2")
   (synopsis "Python binding for minimap2")
   (description "This package provides a convenient interface to minimap2,
                                  " print(mappy.revcomp("
                                  "mappy.Aligner('test/MT-human.fa')"
                                  ".seq('MT_human', 100, 200)))"))))
    (native-inputs
     (list python-cython python-setuptools))
    (inputs
     (list zlib))
    (home-page "https://github.com/lh3/minimap2")
    (synopsis "Python binding for minimap2")
    (description "This package provides a convenient interface to minimap2,
a fast and accurate C program to align genomic and transcribe nucleotide
sequences.")
   (license license:expat)))
    (license license:expat)))

(define-public miniasm
  (package