~ruther/guix-local

2ddcaae239be0d819323fa9b81bbe197ff407616 — Ricardo Wurmus 7 months ago ee72d16
gnu: r-basicstarrseq: Update to 1.38.0.

* gnu/packages/bioconductor.scm (r-basicstarrseq): Update to 1.38.0.
[propagated-inputs]: Remove r-genomeinfodb; add r-seqinfo.

Change-Id: Id98466077a935a0f1d4a0d8c0912be870af02722
1 files changed, 3 insertions(+), 7 deletions(-)

M gnu/packages/bioconductor.scm
M gnu/packages/bioconductor.scm => gnu/packages/bioconductor.scm +3 -7
@@ 27804,21 27804,17 @@ pre-specified groups of cells.")
(define-public r-basicstarrseq
  (package
    (name "r-basicstarrseq")
    (version "1.36.0")
    (version "1.38.0")
    (source
     (origin
       (method url-fetch)
       (uri (bioconductor-uri "BasicSTARRseq" version))
       (sha256
        (base32 "195cpbmnz2hl1yxjq86qjdk2ns96bhvjq89kv379pq8xiais3mmz"))))
        (base32 "06yxawx34bfr1112kkrd1g7n27qfxrnxq699ap18469vxypz2dw8"))))
    (properties `((upstream-name . "BasicSTARRseq")))
    (build-system r-build-system)
    (propagated-inputs
     (list r-genomeinfodb
           r-genomicalignments
           r-genomicranges
           r-iranges
           r-s4vectors))
     (list r-genomicalignments r-genomicranges r-iranges r-s4vectors r-seqinfo))
    (native-inputs (list r-knitr))
    (home-page "https://bioconductor.org/packages/BasicSTARRseq")
    (synopsis "Basic peak calling on STARR-seq data")