From 2ddcaae239be0d819323fa9b81bbe197ff407616 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Tue, 25 Nov 2025 13:50:47 +0100 Subject: [PATCH] gnu: r-basicstarrseq: Update to 1.38.0. * gnu/packages/bioconductor.scm (r-basicstarrseq): Update to 1.38.0. [propagated-inputs]: Remove r-genomeinfodb; add r-seqinfo. Change-Id: Id98466077a935a0f1d4a0d8c0912be870af02722 --- gnu/packages/bioconductor.scm | 10 +++------- 1 file changed, 3 insertions(+), 7 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 7b4e6ca94ccdf0b53129cceccf6c7a05e54f8a01..d0536dc3cf2a3c64d347323997a8e5161fc1f472 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -27804,21 +27804,17 @@ pre-specified groups of cells.") (define-public r-basicstarrseq (package (name "r-basicstarrseq") - (version "1.36.0") + (version "1.38.0") (source (origin (method url-fetch) (uri (bioconductor-uri "BasicSTARRseq" version)) (sha256 - (base32 "195cpbmnz2hl1yxjq86qjdk2ns96bhvjq89kv379pq8xiais3mmz")))) + (base32 "06yxawx34bfr1112kkrd1g7n27qfxrnxq699ap18469vxypz2dw8")))) (properties `((upstream-name . "BasicSTARRseq"))) (build-system r-build-system) (propagated-inputs - (list r-genomeinfodb - r-genomicalignments - r-genomicranges - r-iranges - r-s4vectors)) + (list r-genomicalignments r-genomicranges r-iranges r-s4vectors r-seqinfo)) (native-inputs (list r-knitr)) (home-page "https://bioconductor.org/packages/BasicSTARRseq") (synopsis "Basic peak calling on STARR-seq data")