gnu: r-segmented: Update to 2.1-4. * gnu/packages/statistics.scm (r-segmented): Update to 2.1-4. Change-Id: I63be449ed99a70ca7a7a037ec8aae9a0774a2d8d
gnu: r-rcurl: Update to 1.98-1.17. * gnu/packages/statistics.scm (r-rcurl): Update to 1.98-1.17. Change-Id: I2545d21b772d959111a1ac8e89954a2ae874e16d
gnu: r-rcpparmadillo: Update to 14.4.2-1. * gnu/packages/statistics.scm (r-rcpparmadillo): Update to 14.4.2-1. Change-Id: Iee87f621fcc9417fd5f30f17b88a95744ac66570
gnu: r-rlang: Update to 1.1.6. * gnu/packages/statistics.scm (r-rlang): Update to 1.1.6. Change-Id: I4674ea5b582f5e924ed70b6b1c8eb175496eebad
gnu: r-r6: Update to 2.6.1. * gnu/packages/statistics.scm (r-r6): Update to 2.6.1. Change-Id: I00743146c49f86cc226d2fb0122f3d9f87539288
gnu: r-tclust: Update to 2.1-0. * gnu/packages/statistics.scm (r-tclust): Update to 2.1-0. [properties]: Record updater-extra-native-inputs. [propagated-inputs]: Remove r-ellipsis; add r-rlang. Change-Id: I887029c302ba9ec12852e1128a05e27ed00de525
gnu: r-classdiscovery: Update to 3.4.8. * gnu/packages/bioconductor.scm (r-classdiscovery): Update to 3.4.8. Change-Id: I8d5c707ae55161cf93bf14ab3a4f87c40000327d
gnu: r-metap: Update to 1.12. * gnu/packages/bioconductor.scm (r-metap): Update to 1.12. Change-Id: Iad76b9dc0261cad250ed087e64c0490deecafd34
gnu: r-ggpicrust2: Update to 2.1.2. * gnu/packages/bioconductor.scm (r-ggpicrust2): Update to 2.1.2. [propagated-inputs]: Remove r-aldex2, r-circlize, r-deseq2, r-edger, r-ggally, r-lefser, r-limma, r-maaslin2, r-metagenomeseq, r-microbiomestat, and r-summarizedexperiment; add r-ggplotify, r-ggraph, r-magrittr, r-progress, and r-tidygraph. [native-inputs]: Add r-fgsea, r-ggvenndiagram, r-mockery, and r-upsetr. Change-Id: I174ff92587f70e46d2c3520c0ff1bbf38e4b8172
gnu: r-scgate: Update to 1.7.0. * gnu/packages/bioconductor.scm (r-scgate): Update to 1.7.0. Change-Id: I647cbfc4c289ba8a010e52732b6340856fe1d5b3
gnu: r-pscbs: Update to 0.68.0. * gnu/packages/bioconductor.scm (r-pscbs): Update to 0.68.0. [propagated-inputs]: Remove r-listenv. [native-inputs]: Remove r-r-devices. Change-Id: Ib198ca104b43c77790c258e8c53fcc34f2b521a1
gnu: r-dsb: Update to 2.0.0. * gnu/packages/bioconductor.scm (r-dsb): Update to 2.0.0. [native-inputs]: Add r-spelling. Change-Id: I1fdebc33bb8a57057b5b8a2ab8b4e401e5631c97
gnu: r-leidenbase: Update to 0.1.35. * gnu/packages/cran.scm (r-leidenbase): Update to 0.1.35. Change-Id: I321909205ff31abb20cfb7dd37d0a642a0ca451e
gnu: r-terra: Update to 1.8-42. * gnu/packages/cran.scm (r-terra): Update to 1.8-42. [properties]: Record updater-ignored-inputs. [inputs]: Remove openssh and openssl; add tbb. Change-Id: I5c3841da2f001c2723f12a6b0bb31485b7a17979
gnu: r-parameters: Update to 0.25.0. * gnu/packages/cran.scm (r-parameters): Update to 0.25.0. Change-Id: I1ae846fbb20beaf4eabc062fed78fae0f64e07c2
gnu: r-networkd3: Update to 0.4.1. * gnu/packages/cran.scm (r-networkd3): Update to 0.4.1. [source]: Simplify snippet. [arguments]: Use minify-build-system in 'process-javascript phase. [native-inputs]: Replace node-uglify-js with esbuild; update d3.v4.js. [propagated-inputs]: Add r-data-tree and r-jsonlite. Change-Id: I0ed711c56f5a59399614f602bbdfee35bc7e1326
gnu: r-duckdb: Update to 1.2.2. * gnu/packages/cran.scm (r-duckdb): Update to 1.2.2. [properties]: Record updater-extra-native-inputs and updater-ignored-native-inputs. [native-inputs]: Add r-adbcdrivermanager. Change-Id: I80daed5aeaca521b501a80b8e1e192f2219861a2
gnu: Add r-ggsurvfit. * gnu/packages/cran.scm (r-ggsurvfit): New variable. Change-Id: I39f0057e1335f2d3f9597f2b0ffa2b9755a3c20d
gnu: r-threejs: Update to 0.3.4. * gnu/packages/cran.scm (r-threejs): Update to 0.3.4. [arguments]: Rewrite 'process-javascript phase to use minify-build-system. [native-inputs]: Replace node-uglify-js with esbuild. Change-Id: I9d062dedbe7676bd331c8b2ba4fbbdc4fe7efb75
gnu: r-git2r: Update to 0.36.2. * gnu/packages/cran.scm (r-git2r): Update to 0.36.2. [properties]: Record updater-extra-native-inputs and updater-ignored-native-inputs. Change-Id: I06cfe9a70fb2e3aff1e07717e4a1662100fd2369