gnu: bundler: Update to 1.11.2.
* gnu/packages/ruby.scm (bundler): Update to 1.11.2.
gnu: vigra: Update to 1.11.0.
* gnu/packages/image.scm (vigra)[source]: Update to 1.11.0.
[arguments]: Disable parallel builds.
gnu: aria2: Update to 1.21.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.21.0.
gnu: libotr: Fix tests on mips64el.
* gnu/packages/patches/libotr-test-auth-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (libotr)[source]: Add patch.
substitute: Do not leak file descriptors for TLS connections.
Partially fixes <http://bugs.gnu.org/20145>.
* guix/scripts/substitute.scm (fetch, download-cache-info):
(http-multiple-get, fetch-narinfos, progress-report-port): Use
'close-connection' instead of 'close-port'.
substitute: Cache transient HTTP errors for 10mn.
* guix/scripts/substitute.scm (fetch-narinfos)[handle-narinfo-response]:
Cache transient errors for 10mn.
(%narinfo-transient-error-ttl): New variable.
lint: Do not leak file descriptors for TLS connections.
Partially fixes <http://bugs.gnu.org/20145>.
* guix/scripts/lint.scm (probe-uri): Use 'close-connection' instead of
'close-port'.
download: Add 'close-connection'.
Partially fixes <http://bugs.gnu.org/20145>.
* guix/build/download.scm (add-weak-reference): Remove.
(%tls-ports): New variable.
(register-tls-record-port): New procedure.
(tls-wrap): Use it instead of 'add-weak-reference'.
(close-connection): New procedure.
substitute: Update progress for responses different from 200/404.
* guix/scripts/substitute.scm (fetch-narinfos)[handle-narinfo-response]:
Add missing call to 'update-progress!'.
gnu: postgresql: Update to 9.5.1.
* gnu/packages/databases.scm (postgresql): Update to 9.5.1.
gnu: mysql: Update to 5.7.11.
* gnu/packages/databases.scm (mysql): Update to 5.7.11.
[source]: Add archives as alternate download location.
[arguments]: Remove custom phase 'strip-extra-references. Add
substitution to target boost-1.60.
gnu: gnome-session: Add elogind input.
* gnu/packages/gnome.scm (gnome-session): Add elogind input, while
disabling the use of systemd's journal.
gnu: bless: Remove bundled sources for sparsehash.
* gnu/packages/bioinformatics.scm (bless)[source]: Delete
"google-sparsehash" sources.
[inputs]: Add "sparsehash".
gnu: Add CD-HIT.
* gnu/packages/bioinformatics.scm (cd-hit): New variable.
doc: Add missing comma after @xref.
Reported by Alex Kost <alezost@gmail.com>.
* doc/guix.texi (Service Reference): Add comma after @xref.
doc: GNOME is now available.
* doc/guix.texi (Limitations): Rephrase item about GNOME and KDE.
gnu: elogind: Update to 219.14.
* gnu/packages/freedesktop.scm (elogind): Update to 219.14.
gnu: emacs-pdf-tools: Use emacs-build-system for elisp side.
* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Add phases from
emacs-build-system to build elisp side.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
gnu: Add WAH plugins.
* gnu/packages/audio.scm (wah-plugins): New variable.