gnu: Add python-anndata-0.11. * gnu/packages/python-science.scm (python-anndata-0.11): New variable. Change-Id: I49d804d4434dfde618cfe7da76cae1d8db9444af
gnu: python-cyvcf2: Update to 0.31.2. * gnu/packages/bioinformatics.scm (python-cyvcf2): Update to 0.31.2. [native-inputs]: Remove python-wheel. Change-Id: Ieba07d46864472b2c7d6a3f7936f1d225c174825
gnu: python-cgatcore: Update to 0.6.16. * gnu/packages/bioinformatics.scm (python-cgatcore): Update to 0.6.16. [arguments] <test-flags>: Ignore not compatible test file. [native-inputs]: Remove python-wheel. Change-Id: Iec565987285443ea7303c44fe7eb0c8c967a5852
gnu: python-bx-python: Update to 0.14.0. * gnu/packages/bioinformatics.scm (python-bx-python): Update to 0.14.0. [propagated-inputs]: Add python-pyparsing. [native-inputs]: Remove python-wheel. Change-Id: I790eff97d37ea82220d7643d415c1213ff010411
gnu: packages/build-tools: Sort modules. * gnu/packages/build-tools.scm: Group use-modules semantically and sort alphabetically. Change-Id: I3709f96c9484b311a89d73349074efbe9909877a
gnu: hyprland-protocols: Update to 0.7.0. * gnu/packages/freedesktop.scm (hyprland-protocols): Update to 0.7.0. Change-Id: Id57c9e2257b13d36da115080f9d04db14ccdb33a Signed-off-by: John Kehayias <john@guixotic.coop>
gnu: hyprlock: Update to 0.9.2. * gnu/packages/xdisorg.scm (hyprlock): Update to 0.9.2. Change-Id: I8db39736e7404274fc26883393e905dfba4459eb Signed-off-by: John Kehayias <john@guixotic.coop>
gnu: hyprsunset: Update to 0.3.3. * gnu/packages/xdisorg.scm (hyprsunset): Update to 0.3.3. Change-Id: I87a5a8d7e9a0d766253bca28d6af8fcf430eea5c Signed-off-by: John Kehayias <john@guixotic.coop>
gnu: aquamarine: Update to 0.9.5. * gnu/packages/xdisorg.scm (aquamarine): Update to 0.9.5. Change-Id: I740152a5d5303447a785b350eeddc52ea63c86a8 Signed-off-by: John Kehayias <john@guixotic.coop>
gnu: hyprutils: Update to 0.10.0. * gnu/packages/cpp.scm (hyprutils): Update to 0.10.0. Change-Id: I47cf7881625f9487db29d06209fddbf470a03037 Signed-off-by: John Kehayias <john@guixotic.coop>
gnu: hyprgraphics: Update to 0.2.0. Note: we use librsvg-for-system but for non-Rust systems the current version is too old for this package to build there. * gnu/packages/cpp.scm (hyprgraphics): Update to 0.2.0. [inputs]: Add librsvg-for-system, pango. Change-Id: I2437fa12278ee33de098a25fdb3e5a52f17ce6b1 Signed-off-by: John Kehayias <john@guixotic.coop> Modified-by: John Kehayias <john@guixotic.coop>
gnu: hyprland: Update to 0.51.1. * gnu/packages/wm.scm (hyprland): Update to 0.51.1. Change-Id: Ia8fdf2d3f9a318202e5b1070d2efac6e819e061e Signed-off-by: John Kehayias <john@guixotic.coop>
gnu: Remove wayland-protocols-next. * gnu/packages/freedesktop.scm (wayland-protocols-next): Delete variable. * gnu/packages/wm.scm (hyprland)[inputs]: Change wayland-protocols-next to wayland-protocols. This was a temporary package expected to be removed once the mesa-updates branch was merged, it was only in use by hyprland. See 7c1a30f3f91bd2e173d43ef110ed471abfcbb17e. Change-Id: I9bf2f986815344ec79f013c0446cffbfdbdd76d7 Signed-off-by: John Kehayias <john@guixotic.coop>
gnu: python-cwlformat: Fix tests. * gnu/packages/bioinformatics.scm (python-cwlformat)[arguments] <test-flags>: Skip one test. [native-inputs]: Remove python-wheel; add python-pytest. Change-Id: Ic72c23fbe9a456d45e140c47ed06685ca5457b4b
gnu: python-prov: Update to 2.1.1. * gnu/packages/python-xyz.scm (python-prov): Update to 2.1.1. [source] <origin>: Switch to git-fetch. [arguments] <#:phases>: Remove 'check phase, add 'disable-tests phase. <#:test-backend>: Use unittest. <#:test-flags>: Move flags from old 'check phase here. [propagated-inputs]: Remove python-rdflib-6; add python-pydot, graphviz, and python-rdflib. [native-inputs]: Remove graphviz, python-pydot, and python-wheel. Change-Id: I1dedb6b6f4394cdf14cdd496aa74e3390e48727d Co-authored-by: Ghislain Vaillant <ghislain.vaillant@inria.fr> Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-toolrack: Fix build by updating to 4.0.3. * gnu/packages/python-xyz.scm (python-toolrack): Update to 4.0.3. [native-inputs]: Remove python-wheel. Change-Id: I35426f80aea45d34bb4cc8d7d24643459d399565 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: python-djvulibre: Update to 0.9.3. python-djvulibre 0.8.6 fails with recent updates on master branch (python-team and messa-updates merged). Old repository is archived, new maintainer has taken over in new repository. Old PyPI package is called python-djvulibre, new PyPI package is djvulibre-python. * gnu/packages/python-xyz.scm (python-djvulibre): Update to 0.9.3. [source]: Switch to git-fetch. <url>: Switch to new maintainer. [build-system]: Switch to pyproject-build-system. [arguments] <#:phases>: Replace 'check phase. [inputs]: Remove python-cython. [native-inputs]: Remove python-nose; add python-cython, python-pytest, and python-setuptools. [home-page]: Switch to new maintainer. Fixes: guix/guix#3032 Change-Id: I5ee548ffa2debf0f1f85f3b0036fd47fc5c77a91 Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: Add zeta. * gnu/packages/games.scm (zeta): New variable. Change-Id: I9182e23f717cd53cf6743cf6a7dc2282b60e3dc5
gnu: python-telethon: Update to 1.41.1. * gnu/packages/python-xyz.scm (python-telethon): Update to 1.41.1. [build-system]: Switch to pyproject-build-system [arguments]: Drop all. [native-inputs]: Remove python-pytest-asyncio; add python-pytest-asyncio-0.26, and python-setuptools. Change-Id: I92d358fba50801719549c33cfc77b79ab2024378 Modified-by: Sharlatan Hellseher <sharlatanus@gmail.com> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
gnu: texmaker: Update to 6.0.1. * gnu/packages/tex.scm (texmaker): Update to 6.0.1. [source]: Switch to https. [arguments]<#:phases>: Remove replaced phases. [inputs]: Remove poppler-qt5, qtbase-5, qtwayland-5, and qtscript-5; add poppler-qt6, qtbase, qtwayland, qt5compat, qtdeclarative, qttools, and qtwebengine. [properties]: Add release-monitoring-url. Change-Id: I900f550c96d3b6addea26ec279a4bdb411bcc6a8 Reviewed-by: Nicolas Goaziou <guix@nicolasgoaziou.fr> Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>