gnu: python-xdoctest: Update to 1.3.0.

* gnu/packages/python-xyz.scm (python-xdoctest): Update to 1.3.0.
[native-inputs]: Remove python-pytest, python-pytest-cov and
python-wheel; add python-pytest-bootstrap.

Change-Id: I1f5e9b2c15c35054bfaa7f2179fb5b51e265efb9

gnu: python-xopen: Move to python-compression.

* gnu/packages/python-xyz.scm (python-xopen): Move from here ...
* gnu/packages/python-compression.scm: ... to here.

Change-Id: Ibd5d8401fb45816855c85b0535738ce6b44d5e82

gnu: python-xopen: Update to 1.8.0.

* gnu/packages/python-xyz.scm (python-xopen): Update to 1.8.0.
[propagated-inputs]: Remove python-typing-extensions.
[native-inputs]: Remove python-wheel.

Change-Id: I0c2c14a787bfab74af70ebbc335670b00ec568a4

gnu: python-isal: Update to 1.8.0.

* gnu/packages/python-compression.scm (python-isal): Update to 1.8.0.
[arguments] <test-backend>: Let to use Pytest.
[native-inputs]: Remove python-wheel; add python-pytest and
python-setuptools-scm.

Change-Id: Ibc98bf92b69545042ce0dbf433f37bfb763a8d7d

gnu: isa-l: Update to 2.31.1.

* gnu/packages/compression.scm (isa-l): Update to 2.31.1.

Change-Id: Ibcbe59a5b364cb543d7aa186b70a289f321c26b5

gnu: python-xyzservices: Move to python-web.

* gnu/packages/python-xyz.scm (python-xyzservices): Move from here ...
* gnu/packages/python-web.scm: ... to here.

Change-Id: I5e8fbed0e3ba2369f5740529914ad9b9af8bb8ff

gnu: python-xyzservices: Update to 2025.4.0.

* gnu/packages/python-xyz.scm (python-xyzservices): Update to 2025.4.0.
[native-inputs]: Remove python-wheel; add python-setuptools-scm.

Change-Id: I87436dc57b8348186562cebbddc50f6769e8be31

gnu: python-xattr: Update to 1.2.0.

* gnu/packages/python-xyz.scm (python-xattr): Update to 1.2.0.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-pytest and python-setuptools.

Change-Id: Ic3421cdf746e933458c686f8217a7a3a66f2dccb

gnu: vulkan-tools: Fix loading of libvulkan.

Volk dependency was removed upstream and now uses direct dlopen call.

* gnu/packages/vulkan.scm (vulkan-tools)[arguments]<#:phases>: Add
patch-libvulkan-file-name phase so that dlopen will work.
[native-inputs]: Remove vulkan-volk.

Change-Id: Id7d442fea945f1e0a77028c0ea22e148b6cc6801

gnu: godot: Update to 4.5.

Godot 4.5 has some issues with system files taking precedence over ones
included in the "thirdparty" directory; see
<https://github.com/godotengine/godot/pull/111094> for discussion.  This was
further motivation to use the upstream default of enabling volk, unbundling
it, and dropping the vulkan-loader input.  The volk files are already patched
to correctly load libvulkan.

* gnu/packages/game-development.scm (godot): Update to 4.5.
[source]: Add patch to unbundle libjpeg-turbo.  Update snippet to preserve
accesskit, grisu2, smaa, and remove volk.
[arguments]<#:scons-flags>: Disable builtin libjpeg-turbo and sdl.
<#:phases>: In fix-dlopen-paths phase remove libudev and volk patching.  Add
phase unbundle-volk.
[inputs]: Add libjpeg-turbo-3, sdl3, and vulkan-volk.  Remove vulkan-loader.
* gnu/packages/patches/godot-libjpeg-turbo-unbundle.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.

Change-Id: I3feb071ecfdb7312e9d6d8c2213a1448481753dc

gnu: Add libjpeg-turbo-3.

* gnu/packages/image.scm (libjpeg-turbo-3): New variable.

Change-Id: I358bb5c661e3c78afbe9dd49839f766982e251e2

gnu: Add xmedcon-minimal.

* gnu/packages/medical.scm (xmedcon-minimal): New variable.

Change-Id: Ie817bd1c994d8978d4f07f16fce9a6d103aa9423
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: Add python-show-in-file-manager.

* gnu/packages/python-xyz.scm (python-show-in-file-manager): New variable.

Change-Id: I832fa8627aad71e28bb4679597e37d6c73be512e

gnu: Add python-hatch-gettext.

* gnu/packages/python-xyz.scm (python-hatch-gettext): New variable.

Change-Id: Ic2baf9839a6bf08b0fc8cc2c882b42a9e35f0848

gnu: Add python-hatch-argparse-manpage.

* gnu/packages/python-xyz.scm (python-hatch-argparse-manpage): New variable.

Change-Id: I339b3ec8325934115597ac0e3293c6adf20a78a4

gnu: python-colour: Switch to pyproject.

* gnu/local.mk (python-colour):
[source]: Switch to git-fetch. Add patch to remove d2to1 dependency.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:phases>: Add phase 'set-version.
<#:tests?>: Disable them.
[native-inputs]: Add python-setuptools.
[description]: Improve style.

Change-Id: Icf722a429f7bb70b08e81d0048624c5ba2e82a89
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-pyprind: Switch to pyproject.

* gnu/packages/python-xyz.scm (python-pyprind):
[source, description]: Improve style.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-pytest, python-setuptools.

Change-Id: I53abd559089adfe62583952a650f516da22f2d7c
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-mkdocs-markdownextradata-plugin: Switch to pyproject.

* gnu/packages/python-xyz.scm (python-mkdocs-markdownextradata-plugin):
[source, synopsis, description]: Improve style.
[build-system]: Switch to pyproject-build-system.
[native-inputs]: Add python-setuptools.

Change-Id: Ie433b5ce72311464fb9f79649ed879328bb8b1bd
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-mkdocs: Switch to pyproject.

* gnu/packages/python-xyz.scm (python-mkdocs):
[build-system]: Switch to pyproject-build-system.
[arguments]: Set <#:test-backend> and <#:test-flags>.
<#:phases>: Remove 'check phase replacement.
[native-inputs]: Add python-setuptools.

Change-Id: Ia8588b9faf89c64f6654ec5c14f59e819752b384
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: python-dotmap: Switch to pyproject.

* gnu/packages/python-xyz.scm (python-dotmap):
[source]: Run guix style.
[build-system]: Switch to pyproject-build-system.
[arguments]<#:test-backend>: Set it.
[native-inputs]: Add python-setuptools.

Change-Id: I256a69e671d5f830b1ed3b44ac7d02dd8b216e28
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>