gnu: r-bslib: Update to 0.6.1.

* gnu/packages/cran.scm (r-bslib): Update to 0.6.1.
[source]: Update list of minified JavaScript to delete.
[arguments]: Use minify-build-system; update process-javascript phase.
[propagated-inputs]: Add r-lifecycle.
[native-inputs]: Remove typescript-components; update js-bootstrap5-bundle.

Change-Id: I0aeae3f11a35211e6b429461042dbce2eca85313

gnu: r-pkgbuild: Update to 1.4.3.

* gnu/packages/cran.scm (r-pkgbuild): Update to 1.4.3.
[propagated-inputs]: Remove r-crayon, r-prettyunits, and r-rprojroot.

Change-Id: I0b83188e69aae19ddc62d71da18358777ed9c454

gnu: r-wgcna: Update to 1.72-5.

* gnu/packages/bioconductor.scm (r-wgcna): Update to 1.72-5.

Change-Id: Ib9d3b0e6ba191839e4b22cb0b8f63e6b0e9d2baa

gnu: r-spacetime: Update to 1.3-1.

* gnu/packages/cran.scm (r-spacetime): Update to 1.3-1.

Change-Id: I1fe54f97452c0dd738c6cfced56c406498de73c4

gnu: r-openmx: Update to 2.21.11.

* gnu/packages/cran.scm (r-openmx): Update to 2.21.11.

Change-Id: I1349e0965508f42d183d2e705c356fdd3ac9faf0

gnu: r-spacyr: Update to 1.3.0.

* gnu/packages/cran.scm (r-spacyr): Update to 1.3.0.
[native-inputs]: Add r-r-rsp.

Change-Id: I999db8ad92b2d0799ffa4350847980db30c75409

gnu: r-scales: Update to 1.3.0.

* gnu/packages/cran.scm (r-scales): Update to 1.3.0.
[propagated-inputs]: Add r-cli and r-glue.

Change-Id: I37c4a09d6910f9d8885d253547808d3dc2761748

gnu: r-pbdmpi: Update to 0.5-1.

* gnu/packages/cran.scm (r-pbdmpi): Update to 0.5-1.

Change-Id: Iede248c40a0a57bc5a23015745f426cd4485b38c

gnu: r-rjava: Update to 1.0-10.

* gnu/packages/cran.scm (r-rjava): Update to 1.0-10.
[source]: Delete bundled minified JavaScript.
[arguments]: Use minify-build-system in new phase
'replace-bundled-minified-JavaScript.
[native-inputs]: Add esbuild.

Change-Id: I6ca7724ea61f53995067cca8d6835fe061621567

gnu: Add alsa-scarlett-gui.

* gnu/packages/music.scm (alsa-scarlett-gui): New variable.

Change-Id: Ia92a0be7e0f08cf42bc263f2c321b4617fa6935b

gnu: tascam-gtk: Update to 0.4-0.69fb86f.

* gnu/packages/music.scm (tascam-gtk): Update to 0.4-0.69fb86f.
[inputs]: Replace libxml++-2 with libxml++-3.

Change-Id: Iae8ff22ee7ee5888ff4d24209f2f09fbecf52889

gnu: Add libxml++-3.

* gnu/packages/gnome.scm (libxml++-3): New variable.

Change-Id: I2250766126f433b3f5dcc50cd7eaadec3acadad3

gnu: dezyne: Update to 2.18.0.

* gnu/packages/dezyne.scm (dezyne): Update to 2.18.0.
[inputs]: Add boost.
[arguments]: Change assoc-ref memes to use gexps.

Change-Id: I1212de52db6c2b07122e756c68597b1f8ddbb313

gnu: Add scmackerel.

* gnu/packages/dezyne.scm (scmackerel): New variable.

gnu: pypy: Update to 7.3.13.

The validate-runpath error was previously reported in #57653.

Version update fixes the existing build errors.

* gnu/packages/python.scm (pypy3): Update to 7.3.13.
[source]: Update origin URI.
[arguments]<#:validate-runpath>: Disable check.
[arguments]<#:phases>: Update directory paths.

Change-Id: Ic6ab7dd77e30fa85d6fa5f000f9aa2528951b81e
Co-authored-by: Ludovic Courtès <ludo@gnu.org>

gnu: libtorrent-rasterbar: Disable test_ssl test.

It times out in the ci.guix.gnu.org, so this commit disables it.  It will be
re-enabled once solution is found.

* gnu/packages/bittorrent.scm
(libtorrent-rasterbar)[arguments]<#:phases>['check]: Disable test_ssl test.

Change-Id: Ib396fd8a1786e14baad72ae892bdd0fd3fe7a180
Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: txr: Remove obsolete fix.

* gnu/packages/lisp.scm (txr)[arguments]: Remove 'inhibit-doc-syms-generation'
  phase.

Change-Id: Ibf29e28a82f1821cefbdc87e8bfdf3ffcd4219e5

gnu: xorg-server: Update to 21.1.10 [security fixes].

Fixes CVE-2023-6377 and CVE-2023-6478.  See the X.Org security advisory at
<https://lists.x.org/archives/xorg-announce/2023-December/003435.html> for
details.

* gnu/packages/xorg.scm (xorg-server): Update to 21.1.10.

Change-Id: I20ecf1a2b9fc15cafc1c57e0fa726c7cf3096a78

gnu: racket: Update to 8.11.1.

* gnu/packages/patches/racket-backport-8.10-rktboot.patch: Delete file.
* gnu/packages/patches/racket-backport-8.11-layered-docs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/racket/scm (%racket-origin)[patches]: Likewise.
(%racket-version): Update to 8.11.1.
(%zuo-version): Update to 1.7.
(racket)[inputs]<deinprogramm, draw, drracket, games, gui, htdp>
<parser-tools, plot, rackunit, redex, scribble, slideshow, typed-racket>
<srfi, string-constants, syntax-color, web-server, xrepl>: Update hashes.
<quickscript>: Likewise, and add snippet.
* gnu/packages/chez.scm (chez-scheme-for-racket): Update to
9.9.9-pre-release.18.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>

gnu: hpcguix-web: Update to 0.4.0.

* gnu/packages/web.scm (hpcguix-web): Update to 0.4.0.

Change-Id: I66a4689d7e3e93ed4085db937920374dbb5a796e