gnu: Add python-python3-midi.

* gnu/packages/audio.scm (python-python3-midi): New variable.

gnu: Add python-soundfile.

* gnu/packages/audio.scm (python-soundfile): New variable.

gnu: python-numpy, python-scipy: Remove dependency on lapack.

The dependency on lapack was unused; the LAPACK interface of OpenBLAS is
used instead.  The dependency on lapack was added in
cba256f8faaa18457fc9b77e8b401f17b89bdd75 (numpy) and
719b01c1575b8599b0dca9f245a9d759032f3168 (scipy).

* gnu/packages/python-science.scm (python-scipy)[inputs]: Remove
LAPACK.
* gnu/packages/python-xyz.scm (python-numpy)[inputs]: Likewise.

profiles: Build union of inputs in the right order.

Fixes <https://bugs.gnu.org/49102>.
Reported by Mathieu Othacehe <othacehe@gnu.org>
and Tobias Geerinckx-Rice <me@tobias.gr>.

Fixes a regression introduced in
8cef92d0633850d97c1a1d4521812268f56672be, whereby in case of file
collisions, the "wrong" one would take precedence.

* guix/build/profiles.scm (manifest-sexp->inputs+search-paths): Perform
a breadth-first traversal.  Reverse INPUTS and SEARCH-PATHS in the base
case.
* tests/profiles.scm ("profile-derivation, ordering & collisions"):
New test.

gnu: petsc: Link against OpenBLAS rather than LAPACK.

OpenBLAS performs better than LAPACK, the reference implementation.
This is also consistent with the choice of BLAS/LAPACK implementations
made in most other packages.

* gnu/packages/maths.scm (petsc)[inputs]: Replace LAPACK by OPENBLAS.
[arguments]: Pass "--with-openblas=1".

gnu: python-pikepdf: Update to 2.13.0.

* gnu/packages/python-xyz.scm (python-pikepdf): Update to 2.13.0.

gnu: python-pika: Update to 1.2.0.

* gnu/packages/python-xyz.scm (python-pika): Update to 1.2.0.
[source]: Change to GIT-FETCH.
[arguments]: New field.  Override and disable tests.
[native-inputs]:  Remove PYTHON-PYEV.  Add PYTHON-MOCK, PYTHON-NOSE, and
PYTHON-GEVENT.
(python2-pika): Remove variable.

gnu: libngspice: Delete autogenerated config.h.

* gnu/packages/engineering.scm (libngspice)[arguments]<#:phases>: Rename phase
  'delete-script-files to 'delete-scripts-and-config and delete config.h.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>

gnu: libngspice: Fix KiCad compilation.

* gnu/packages/engineering.scm (libngspice)[arguments]<#:configure-flags>:
  Pass "--with-readline=no".
  [inputs]: Remove readline.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>

gnu: java-kafka-clients: Disable failing test.

* gnu/packages/java.scm (java-kafka-clients): Disable a test that fails
non-deterministically.

gnu: java-jmh: Switch to maven-build-system.

* gnu/packages/java.scm (java-jmh): Switch to maven-build-system.

gnu: java-jmh: Update to 1.32.

* gnu/packages/java.scm (java-jmh): Update to 1.32.
[source]: Switch to the git repository.

gnu: maven-enforcer-parent-pom: Fix pom.

* gnu/packages/maven.scm (maven-enforcer-parent-pom): Fix dependency
versions in pom file.

gnu: maven-core: Hardcode versions we have in Guix.

* gnu/packages/maven.scm (maven-core)[phases]: Replace default hardcoded
versions by versions of packages we have in Guix.

gnu: java-commons-math3: Install to maven repository.

* gnu/packages/java.scm (java-commons-math3)[phases]: Use
install-from-pom.

gnu: Add java-jopt-simple-4.

* gnu/packges/java.scm (java-jopt-simple-4): New variable.
(java-jopt-simple): Install to maven repository structure.

guix: java-utils: Look for actual jar files.

* guix/build/java-utils.scm (install-from-pom): Fix `find-files` to look
only for jar files.

guix: maven: Use a temporary file to fix pom files.

* guix/build/maven/pom.scm (fix-pom-dependencies): Actually use the
temporary file that was created.

guix: maven: Look in local packages when searching for package version.

* guix/build/maven/pom.scm (fix-pom-dependencies): Also look at local
packages when looking for a package version.

guix: maven: Support fixing modules.

* guix/build/maven/pom.scm (fix-pom-dependencies): Support fixing
modules that do not exist.
* guix/build/maven-build-system.scm (fix-pom): Fix modules.