gnu: python-mapie: Update to 0.8.2.

* gnu/packages/statistics.scm (python-mapie): Update to 0.8.2.

Change-Id: I82098caa8ed5d3bf68eec9f374f600d203d6b178

gnu: libngspice: Update to 42.

* gnu/packages/engineering.scm (libngspice, ngspice): Update to 42.

Change-Id: Ib7b72724f8f46ce376bd6517cb2652c870edcb0d

gnu: darktable: Update to 4.6.0.

* gnu/packages/photo.scm (darktable): Update to 4.6.0.

Change-Id: Ic64b02e8d191ba91fde1b95b9bcb4321a471dcba

gnu: darktable: Enable more optional features.

* gnu/packages/photo.scm (darktable)[inputs]: Add libjxl, portmidi.

Change-Id: I7747dfc2e88379a13182590f87514951bdd70e0c

gnu: darktable: Build with GCC.

* gnu/packages/photo.scm (darktable)[arguments][#:phases]: Delete the
'prepare-build-environment phase.
[native-inputs]: Remove clang. Add gcc-13.

Change-Id: Ia0dc1c6a717ccd00cd31d378aa51ce63fbf1806a

gnu: gmic: Update to 3.3.3.

gmic was integrated into Krita 5+.

* gnu/packages/image-processing.scm (gmic, gmic-qt): Update to 3.3.3.
(gmic-qt-krita): Delete variable.

Change-Id: I44e33b570bcf3e1df3eba5eb9ede1f333f8a177a

gnu: labplot: Update to 2.10.1.

* gnu/packages/kde.scm (labplot): Update to 2.10.1.
[source]<origin>: Update URI.

Change-Id: I03d24410304fb14daa20f7a75f6947caed63ab84

gnu: python-symengine: Update to 0.11.0.

* gnu/packages/python-xyz.scm (python-symengine): Update to 0.11.0.
[native-inputs]: Replace python-cython with python-cython-3.

Change-Id: Ieab464491e3df6e2bdb5b552cbf48ebf67ff81e4

gnu: Add r-trnadbimport.

* gnu/packages/bioconductor.scm (r-trnadbimport): New variable.

Change-Id: I5a232b50c08ef999f691566ccf5c0fbaf0eb21ea

gnu: Add r-trna.

* gnu/packages/bioconductor.scm (r-trna): New variable.

Change-Id: Ifce902910fa75ddc471d8a25cc974307c19fd1d0

gnu: Add r-modstrings.

* gnu/packages/bioconductor.scm (r-modstrings): New variable.

Change-Id: Ia61816213a7d128ab50a9ae2b2c8879e6ac00499

gnu: Add r-structstrings.

* gnu/packages/bioconductor.scm (r-structstrings): New variable.

Change-Id: I9759520a03ee8178432591c48bf56fb25a379f27

gnu: Add python-mediapy.

* gnu/packages/python-xyz.scm (python-mediapy): New variable.

Change-Id: I2e55c018670053c662ae2d896feefab3b505b139

gnu: Add r-flames.

* gnu/packages/bioconductor.scm (r-flames): New variable.

Change-Id: I551a8f9d7de16e2281898b9541572dd244aadc36

gnu: kubo: Update to 0.16.0.

* gnu/packages/ipfs.scm (kubo): Update to 0.16.0.
  [arguments]: Use go-1.18.
  [home-page]: Set to "https://ipfs.tech".

Change-Id: I06239354b0c9c23294d5aeac6d01f67636d5d3a5
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>

gnu: emacs-evil-quickscope: Skip failing test.

* gnu/packages/emacs-xyz.scm (emacs-evil-quickscope)
[arguments]: Use gexps.  Add disable-failing-tests phase.

Change-Id: If372531778eab6e3fc164a2f63b98d6775193114

gnu: emacs-shx: Fix test failure.

* gnu/packages/patches/emacs-shx-byte-compilation-test.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/emacs-xyz.scm (emacs-shx): Apply it.

Change-Id: I6d8edd3b50f99f1c4cd495216caf9648dfee4ea3

gnu/local.mk: Sort Emacs patches and fix 2044 year in copyright notice.

* gnu/local.mk: Correct 2044 copyright year.
(dist_patch_DATA): Sort emacs patches.

Change-Id: Ib9669bb1d7fb2556d6d809d62624981fa66d27f3

gnu: emacs-org-journal: Disable failing tests.

* gnu/packages/emacs-xyz.scm (emacs-org-journal)
[arguments]: Add disable-failing-tests phase.

Change-Id: I466cb46613a7048ccbda66cd7855001a04871891

gnu: emacs-ess: Disable flaky "command-without-trailing-newline-test" test.

* gnu/packages/statistics.scm [arguments]: Add new disable-etests syntax in
'skip-failing-tests phase, and use it to disable the
'command-without-trailing-newline-test' test.

Change-Id: I99f52685691d86dc633fe6061f9ef3332159eb4e