gnu: python-mysqlclient: Enable selected tests.

* gnu/packages/databases.scm (python-mysqlclient)
[build-system]: Change to pyproject-build-system.
[arguments]
<#:phases>: Add 'fix-test phase.
<#:test-flags>: Specify tests to run.
[native-inputs]: Add python-pytest.
[inputs]: Replace mariadb:dev with mariadb-connector-c.
[home-page]: Update.

Change-Id: I5ae0873155f9a7cc90a318762b77864665fadc01
Signed-off-by: Hilton Chain <hako@ultrarare.space>

gnu: libtommath: Update to 1.3.0.

* gnu/packages/multiprecision.scm (libtommath): Update to 1.3.0.

Change-Id: If0b4758abb634f4e7564d90e8a5534ebdf6579a6

home: services: bash: Reorder aliases.

Reported in <https://issues.guix.gnu.org/67652>.

* home/services/shells.scm (add-bash-configuration): Reorder aliases.

Change-Id: I288856bb6befe378ca60ef78578acc069cb18532
Reported-by: Atte Torri <atte.torri@universite-paris-saclay.fr>
Signed-off-by: Hilton Chain <hako@ultrarare.space>

gnu: Add tree-sitter-matlab.

* gnu/packages/tree-sitter.scm (tree-sitter-matlab): New variable.

Change-Id: I5a72d20e18ed370852b9a6d3037d94675aad8c4b
Signed-off-by: Hilton Chain <hako@ultrarare.space>

gnu: Add tree-sitter-ungrammar.

* gnu/packages/tree-sitter.scm (tree-sitter-ungrammar): New variable.

Change-Id: I162e1ffe692aaf0b81080e4df239bba10da477ed
Signed-off-by: Hilton Chain <hako@ultrarare.space>

gnu: Add tree-sitter-ron.

* gnu/packages/tree-sitter.scm (tree-sitter-ron): New variable.

Change-Id: I26abfa4a298b23a14bcea852c2974e694daddecd
Signed-off-by: Hilton Chain <hako@ultrarare.space>

gnu: Add tree-sitter-hcl.

* gnu/packages/tree-sitter.scm (tree-sitter-hcl): New variable.

Change-Id: I2522cf5cc30b313c16636821deed2752ea65b43e
Signed-off-by: Hilton Chain <hako@ultrarare.space>

gnu: Add tree-sitter-kdl.

* gnu/packages/tree-sitter.scm (tree-sitter-kdl): New variable.

Change-Id: I40a9d9629e29d1682999d9787d4092775be23c19
Signed-off-by: Hilton Chain <hako@ultrarare.space>

linux-modules: Ignore nonexistent module files on boot.

This is a follow-up to 8f8ec56052766aa5105d672b77ad9eaca5c1ab3c, which only
covers building initrd, while the booting code still tries to load nonexistent
files for builtin modules.

* gnu/build/linux-modules.scm (load-linux-modules-from-directory): Ignore
nonexistent module files.

Change-Id: I09ef207e82397e915e671c8464b92bcf90f03dcf

gnu: Add python-icecream.

* gnu/packages/python-xyz.scm (python-icecream): New variable.

Change-Id: I866d0ce591a1b81fdd7e0ee706cb8e9791e70c49
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>

gnu: Add python-pytest-relaxed.

* gnu/packages/check.scm (python-pytest-relaxed): New variable.

Change-Id: I9c506fe6a6586c87d72775a0567fd3c45ba03568
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>

gnu: r-bionero: Update to 1.10.2.

* gnu/packages/bioconductor.scm (r-bionero): Update to 1.10.2.

Change-Id: I419476f683156fa612b35680c5de3f8044851439

gnu: r-flowworkspace: Update to 4.14.3.

* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.14.3.

Change-Id: I2a717e99d7b71df0c3774ad235e0fe87f5b2aa19

gnu: r-rprotobuflib: Update to 2.14.1.

* gnu/packages/bioconductor.scm (r-rprotobuflib): Update to 2.14.1.

Change-Id: I10d2e5f7d7e55039085c51592b2046a340810a0a

gnu: r-flowcore: Update to 2.14.2.

* gnu/packages/bioconductor.scm (r-flowcore): Update to 2.14.2.

Change-Id: I61158d6b9243c4386149364ef0d36a0d1bd5e4b8

gnu: r-trackviewer: Update to 1.38.2.

* gnu/packages/bioconductor.scm (r-trackviewer): Update to 1.38.2.

Change-Id: I1b26ba59abbba23d8215a16fdf9bbb7e49e54260

gnu: r-dittoseq: Update to 1.14.3.

* gnu/packages/bioconductor.scm (r-dittoseq): Update to 1.14.3.

Change-Id: I85f76e70f0b275749d622dad28346c0912e09b57

gnu: r-diffcyt: Update to 1.22.1.

* gnu/packages/bioconductor.scm (r-diffcyt): Update to 1.22.1.

Change-Id: Id1d88a4a660908c949107ffaf3ec33e5d69bff11

gnu: r-hdcytodata: Update to 1.22.1.

* gnu/packages/bioconductor.scm (r-hdcytodata): Update to 1.22.1.

Change-Id: I7c159709261c7862a171aac14962b4b18cf1459f

gnu: r-rstudioapi: Update to 0.16.0.

* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.16.0.

Change-Id: I587b1c0a7ba302ba158cc8c40d1bf3477a106d8a