~ruther/guix-local

2d9da70b — Ricardo Wurmus 9 years ago 
gnu: r-reshape2: Update to 1.4.2.

* gnu/packages/statistics.scm (r-reshape2): Update to 1.4.2.
c2a9e991 — Ricardo Wurmus 9 years ago 
gnu: r-stringi: Update to 1.1.2.

* gnu/packages/statistics.scm (r-stringi): Update to 1.1.2.
03f72a1e — Ricardo Wurmus 9 years ago 
gnu: r-matrix: Update to 1.2-7.1.

* gnu/packages/statistics.scm (r-matrix): Update to 1.2-7.1.
9e087a1f — Ricardo Wurmus 9 years ago 
gnu: r-colorspace: Update to 1.2-7.

* gnu/packages/statistics.scm (r-colorspace): Update to 1.2-7.
e1c2b7e2 — Ricardo Wurmus 9 years ago 
gnu: r-jsonlite: Update to 1.1.

* gnu/packages/web.scm (r-jsonlite): Update to 1.1.
2ffcd660 — Ricardo Wurmus 9 years ago 
gnu: r-curl: Update to 2.2.

* gnu/packages/web.scm (r-curl): Update to 2.2.
a46cc723 — Ricardo Wurmus 9 years ago 
gnu: r-seqinr: Update to 3.3-3.

* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-3.
062737a1 — Ricardo Wurmus 9 years ago 
gnu: r-rcpparmadillo: Update to 0.7.500.0.0.

* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to
7.500.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.500.0.0.
7397cd9e — Ricardo Wurmus 9 years ago 
gnu: armadillo: Update to 7.500.0.

* gnu/packages/maths.scm (armadillo): Update to 7.500.0.
8e1369f1 — Ricardo Wurmus 9 years ago 
gnu: r-rmarkdown: Update to 1.1.

* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.1.
[propagated-inputs]: Add r-evaluate, r-tibble.
c70271ec — Ricardo Wurmus 9 years ago 
gnu: bioperl-minimal: Update to 1.7.0.

* gnu/packages/bioinformatics.scm (bioperl-minimal): Update to 1.7.0.
39df253e — Marius Bakke 9 years ago 
gnu: mupdf: Modify CVE-2016-8674 patch to apply to 1.9a.

The fix from upstream did not apply cleanly due to many context changes.
This was adapted by cloning mupdf 1.9a from git and fixing conflicts
after applying our patches and cherry-picking upstream commit 1e03c06.

This is a follow-up to 47a04fca999b91309d196afc9ebf4d8ac6f2083f.

* gnu/packages/patches/mupdf-CVE-2016-8674.patch: Adapt to 1.9a.
e95ae7c2 — Roel Janssen 9 years ago 
guix package: Display generation diffs.

* guix/ui.scm (display-profile-content-diff): New variable.
* guix/scripts/package.scm (process-query): Use display-profile-content-diff.

In collaboration with Benz Schenk.
b2a2232c — nikita 9 years ago 
gnu: python-certifi: Update to 2016.8.31.

* gnu/packages/python.scm (python-certifi): Update to 2016.8.31.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
07b1fb86 — Marius Bakke 9 years ago 
gnu: security-token: Use 'license:' prefix.

* gnu/packages/security-token.scm (libyubikey)[license]: Add prefix.
(ykclient)[license]: Add prefix.
f9c33960 — Marius Bakke 9 years ago 
gnu: yubico.scm: Rename to security-token.scm.

* gnu/packages/yubico.scm: Delete file.
* gnu/packages/security-token.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
7a6213cb — Marius Bakke 9 years ago 
gnu: offlineimap: Install documentation.

* gnu/packages/mail.scm (offlineimap)[native-inputs]: Add asciidoc and
libxslt.
[arguments]: Add phases 'build-documentation' and
'install-documentation' to build and install manpages. Also remove
unneeded key 'inputs' from 'wrap-binary' phase.
d2a9b531 — Marius Bakke 9 years ago 
gnu: notmuch: Update to 0.23.1.

* gnu/packages/patches/notmuch-emacs-25-compatibility-fix.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/mail.scm (notmuch): Update to 0.23.1. Remove patch.
8f5f6c92 — Efraim Flashner 9 years ago 
gnu: vlc: Add x265 support.

* gnu/packages/video.scm (vlc)[inputs]: Add x265.
e3cb00d2 — Efraim Flashner 9 years ago 
gnu: gst-plugins-bad: Add x265 support.

* gnu/packages/gstreamer.scm (gst-plugins-bad)[inputs]: Add x265.
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