gnu: bdb-5.3: Do not inherit from bdb-4.8.

* gnu/packages/dbm.scm (bdb-5.3): Copy-paste all fields from bdb-4.8.
[inherit]: Remove field.
[source]: Do not inherit.

Change-Id: I818dc2f53bd41bed039e5172404ce3b8e768dd14

gnu: python-cmaes: Update to 0.12.0.

* gnu/packages/machine-learning.scm (python-cmaes): Update to 0.12.0.
[native-inputs]: Remove python-wheel.
[arguments]: Add #:test-flags.

Change-Id: I729be7d54049dd65c4e55c6020e9de274a0299cb

gnu: vlc: Fix build with newer livemedia-utils.

This is a follow-up to commit 4be2dc6bd32f6a99b53580aea3c4ab3968801b52 .

* gnu/packages/patches/vlc-livemedia-2024.11.28.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
* gnu/packages/video.scm (vlc)[source]: Use patch.

Fixes: guix/guix#4579
Change-Id: Ibee73a199f0d47324d30839a6a6f00b71a72a000

gnu: python-cocotb: Update to 2.0.1.

* gnu/packages/electronics.scm (python-cocotb): Update to 2.0.1.

Change-Id: Id69c69fbd5f702284115cbed67bd5a2033ea7066

gnu: systemc: Update to 3.0.2.

* gnu/packages/electronics.scm (systemc): Update to 3.0.2.

Change-Id: I9774c01e61371a8dc644db6d2d94dafa400d9370

gnu: apycula: Update to 0.28.

* gnu/packages/electronics.scm (apycula): Update to 0.28.
[native-inputs]: Remove python-wheel.

Change-Id: I90eb43c2b242e128993e189022acdd7010c69958

gnu: gerbv: Move to electronics.

* gnu/packages/engineering.scm (gerbv): Move from here ...
* gnu/packages/electronics.scm: ... to here.

Change-Id: I7f852d1f44b10f842a1502bd755e4c939cc8ea47

gnu: openjdk: ensure new versions can be found by the updater.

* gnu/packages/java.scm (make-openjdk): Add properties.

Change-Id: Id1b180e11b8d86e928f97ef479faaffd4fd01d67

gnu: weechat: Update to 4.8.0.

* gnu/packages/irc.scm (weechat): Update to 4.8.0.
[inputs]: Replace lua-5.1 with lua.

Change-Id: I39848b22e03c6dcd729541e1103cc573decd1bd3
Signed-off-by: Andreas Enge <andreas@enge.fr>

gnu: perltidy: Deprecate.

* gnu/packages/perl.scm (perltidy): Define as deprecated by perl-tidy.

Fixes: guix/guix#4569
Change-Id: Iacc73077ef04ce8aeb2a2accedf5185a8179d62e

gnu: perl-critic: Refresh input.

* gnu/packages/perl.scm (perl-critic)[propagated-inputs]: Remove perltidy;
add perl-tidy.

Change-Id: Ib42113933e98d1451f2c430aa8ccb4500d195c2a

gnu: clusterssh: Refresh input.

* gnu/packages/admin.scm (clusterssh)[native-inputs]: Remove perltidy;
add perl-tidy.

Change-Id: I8bce49acedd384329b939b621f20205416363bf7

gnu: perl-test-perltidy: Update to 20230226.

* gnu/packages/perl-check.scm (perl-test-perltidy): Update to 20230226.
[propagated-inputs]: Remove perltidy; add perl-tidy.
[native-inputs]: Add perl-module-build and perl-path-tiny.

Change-Id: I4538b2270c86306e829ff32782aa606869fb0f1a

gnu: Add openjdk25.

* gnu/packages/java.scm (openjdk25): New variable.
(openjdk): Define as openjdk25 instead of openjdk24.

Change-Id: I7dab862187343396c4207215a5831792ae27b8a1
Signed-off-by: Andreas Enge <andreas@enge.fr>

gnu: calibre: Update to 8.15.0.

* gnu/packages/ebook.scm (calibre): Update to 8.15.0.

Change-Id: I14b6ea178eee3065e3b74bdd55c9360cf2c442c6
Signed-off-by: Andreas Enge <andreas@enge.fr>

gnu: maak: Update to 0.2.12.

* gnu/packages/build-tools.scm (maak): Update to 0.2.12.

Signed-off-by: Andreas Enge <andreas@enge.fr>

gnu: fuzzel: Update to 1.13.1.

* gnu/packages/xdisorg.scm (fuzzel): Update to 1.13.1.

Change-Id: If637e2b2035bcad2c65594e396eb754a71784a81
Signed-off-by: Andreas Enge <andreas@enge.fr>

gnu: perl-tidy: Update to 20250912.

* gnu/packages/perl.scm (perl-tidy): Update to 20250912.

Change-Id: I09d64b8c62c1b804e3aaa19c056724cec2e5e6a6
Signed-off-by: Andreas Enge <andreas@enge.fr>

gnu: wev: Update to 1.1.0.

* gnu/packages/freedesktop.scm (wev): Update to 1.1.0.

Change-Id: I5db0a61d8777bc08d5996c95eb1b3d493281081a
Signed-off-by: Andreas Enge <andreas@enge.fr>

gnu: xshogi: Fix build.

* gnu/packages/games.scm (xshogi)[#:configure-flags]: Add
"CFLAGS=-Wno-error=implicit-function-declaration".

Change-Id: I5b60c577090f979098a923bc9f95e8d61dd0b41c
Signed-off-by: Andreas Enge <andreas@enge.fr>