gnu: r-edger: Update to 3.20.9.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.20.9.
gnu: r-shortread: Update to 1.36.1.
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.36.1.
gnu: r-dexseq: Update to 1.24.3.
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.3.
gnu: efl: Use separate "include" output.
* gnu/packages/enlightenment.scm (efl)[outputs]: Add 'include' output.
gnu: efl: Update to 1.20.7.
* gnu/packages/enlightenment.scm (efl): Update to 1.20.7.
gnu: Add patchmatrix.
* gnu/packages/music.scm (patchmatrix): New variable.
gnu: ghc-uuid: Fix build.
* gnu/packages/haskell.scm (ghc-uuid)[arguments]: Allow building with a newer
version of QuickCheck.
gnu: golly: Fix source url.
* gnu/packages/games.scm (golly): Fix source url.
gnu: imagemagick: Update to 6.9.9-36.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-36.
gnu: libe-book: Update to 0.1.3.
* gnu/packages/libreoffice.scm (libe-book): Update to 0.1.3.
[propagated-inputs]: Add LIBLANGTAG.
gnu: libabw: Update to 0.1.2.
* gnu/packages/libreoffice.scm (libabw): Update to 0.1.2.
gnu: libpagemaker: Update to 0.0.4.
* gnu/packages/libreoffice.scm (libpagemaker): Update to 0.0.4.
[source](uri): Use HTTPS.
gnu: libmspub: Update to 0.1.4.
* gnu/packages/libreoffice.scm (libmspub): Update to 0.1.4.
[source](uri): Use HTTPS.
gnu: xorgproto: Update to 2018.4.
* gnu/packages/xorg.scm (xorgproto): Update to 2018.4.
gnu: cuirass: Update to aa4c778.
* gnu/packages/ci.scm (cuirass): Update to aa4c778.
gnu: nautilus: Use meson-build-system, update to 3.26.2.
* gnu/packages/gnome.scm (nautilus): Update to 3.26.2.
[build-system]: Use meson-build-system.
[native-inputs]: Add desktop-file-utils and gtk+:bin.
[inputs]: Add libselinux.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
profiles: 'manifest-add' truly deletes duplicate entries.
Fixes <https://bugs.gnu.org/30569>.
Reported by Andreas Enge <andreas@enge.fr>.
* guix/profiles.scm (manifest-add): Don't append ENTRIES as is.
Instead, cons each element of ENTRIES as we fold over it.
Remove unneeded ellispes in 'match' patterns.
gnu: Fix Borg crashes with Python msgpack > 0.5
The Python msgpack library changed its name, but borg (and possibly
other packages) still uses the old name.
Fixes <https://bugs.gnu.org/30662>.
* gnu/packages/python.scm (python-msgpack-transitional): New variable.
* gnu/packages/backup.scm (borg)[inputs]: Use it.
gnu: Remove duplicate definition of emacs-esxml.
* gnu/packages/emacs.scm (emacs-esxml): Remove.