@@ 3,7 3,7 @@
;;; Copyright © 2013, 2015, 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014, 2015 Alex Kost <alezost@gmail.com>
-;;; Copyright © 2014, 2016 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2014, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2015 Amirouche Boubekki <amirouche@hypermove.net>
;;; Copyright © 2014, 2017 John Darrington <jmd@gnu.org>
@@ 1167,57 1167,44 @@ and decompress to 32-bit and big-endian pixel buffers (RGBX, XBGR, etc.).")
(define-public niftilib
(package
- (name "niftilib")
- (version "2.0.0")
- (source (origin
- (method url-fetch)
- (uri (list (string-append "mirror://sourceforge/niftilib/"
- "nifticlib/nifticlib_"
- (string-join (string-split version #\.) "_")
- "/nifticlib-" version ".tar.gz")))
- (sha256
- (base32 "123z9bwzgin5y8gi5ni8j217k7n683whjsvg0lrpii9flgk8isd3"))))
- (build-system gnu-build-system)
- (arguments
- '(#:tests? #f
- #:parallel-build? #f
- #:phases
- (modify-phases %standard-phases
- (replace 'install
- (lambda _
- (for-each
- (lambda (dir)
- (let ((directory (assoc-ref %outputs "out")))
- (mkdir-p (string-append directory "/" dir))
- (zero? (system* "cp" "-a" dir directory))))
- '("bin" "lib" "include"))))
- (replace 'configure
- (lambda _
- (substitute* "Makefile"
- (("^SHELL[ \t]*=[ \t]*csh")
- (string-append "SHELL = "
- (assoc-ref %build-inputs "bash")
- "/bin/sh"))
-
- (("^CFLAGS[ \t]*=[ \t]\\$\\(ANSI_FLAGS\\)")
- "CFLAGS = $(ANSI_FLAGS) -fPIC")
-
- (("^ZLIB_INC[ \t]*=[ \t]*-I/usr/include")
- (string-append "ZLIB_INC = -I"
- (assoc-ref %build-inputs "zlib")
- "/include"))
-
- (("^CP[ \t]*=[ \t]*cp")
- (string-append "CP = "
- (assoc-ref %build-inputs "coreutils")
- "/bin/cp")))
- #t)))))
- (inputs
- `(("zlib" ,zlib)))
- (synopsis "Library for reading and writing files in the nifti-1 format")
- (description "Niftilib is a set of i/o libraries for reading and writing
+ (name "niftilib")
+ (version "2.0.0")
+ (source (origin
+ (method url-fetch)
+ (uri (list (string-append "mirror://sourceforge/niftilib/"
+ "nifticlib/nifticlib_"
+ (string-join (string-split version #\.) "_")
+ "/nifticlib-" version ".tar.gz")))
+ (sha256
+ (base32 "123z9bwzgin5y8gi5ni8j217k7n683whjsvg0lrpii9flgk8isd3"))))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:tests? #f ; there is no test target
+ #:parallel-build? #f ; not supported
+ #:make-flags
+ (list "SHELL=bash"
+ (string-append "ZLIB_INC="
+ (assoc-ref %build-inputs "zlib") "/include")
+ ;; Append "-fPIC" to CFLAGS.
+ (string-append "CFLAGS="
+ "-Wall -ansi -pedantic -fPIC"))
+ #:phases
+ (modify-phases %standard-phases
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out")))
+ (for-each
+ (lambda (dir)
+ (copy-recursively dir (string-append out "/" dir)))
+ '("bin" "lib" "include")))
+ #t))
+ (delete 'configure))))
+ (inputs
+ `(("zlib" ,zlib)))
+ (synopsis "Library for reading and writing files in the nifti-1 format")
+ (description "Niftilib is a set of i/o libraries for reading and writing
files in the nifti-1 data format - a binary file format for storing
medical image data, e.g. magnetic resonance image (MRI) and functional MRI
(fMRI) brain images.")
- (home-page "http://niftilib.sourceforge.net")
- (license license:public-domain)))
+ (home-page "http://niftilib.sourceforge.net")
+ (license license:public-domain)))