~ruther/guix-local

f6147d476d65d04eba3654c3c9251e1bd6eac21a — Sharlatan Hellseher 1 year, 3 months ago 8f17262 
gnu: python-vedo: Update to 2025.5.3.

fenics is no longer required and it fails to build, see #77195.

* gnu/packages/python-science.scm (python-vedo): Update to 2025.5.3, fix
build.
[build-system]: Swap to pyproject-build-system.
[arguments] <tests?>: Disable as depend on remote data.
<phases>: Remove 'fix-tests, 'mpi-setup, use default 'check, keep
'sanity-check; add 'relax-requirements.
[propagated-inputs]: Remove fenics; add python-pygments.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: Ifbe63d794f592083f2e65366404f152fda9b3136
patch browse .tar.gz .zip 
1 files changed, 22 insertions(+), 31 deletions(-)

M gnu/packages/python-science.scm

M gnu/packages/python-science.scm => gnu/packages/python-science.scm +22 -31
@@ 2637,7 2637,7 @@ readable.")
(define-public python-vedo
  (package
    (name "python-vedo")
    (version "2022.2.0")
    (version "2025.5.3")
    (source
     (origin
       (method git-fetch)


@@ 2646,43 2646,34 @@ readable.")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32
         "1hhv4xc4bphhd1zrnf7r6fpf65xvkdqmb1lh51qg1xpv91h2az0h"))))
    (build-system python-build-system)
        (base32 "0hrqyvcxxbc1wz0cnafc8rvsi5mj19kck4b6pmddh25rlhdcr5qb"))))
    (build-system pyproject-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'fix-tests
           ;; These tests require online data.
     (list
      ;; XXX: The whole test suite depends on the data from
      ;; <https://vedo.embl.es/examples> providing samples which need to be
      ;; downloaded during tests, find the way how to enable it.
      #:tests? #f
      #:phases
       #~(modify-phases %standard-phases
         (add-after 'unpack 'relax-requirements
           ;; vtk does not provide Python metadata.
           ;;
           ;; ...checking requirements: ERROR: vedo==2025.5.3
           ;; DistributionNotFound(Requirement.parse('vtk'), {'vedo'})
           (lambda _
             (substitute* "tests/common/test_actors.py"
               (("^st = .*") "")
               (("^assert isinstance\\(st\\.GetTexture\\(\\), .*") ""))
             (delete-file "tests/common/test_pyplot.py")))
         (add-after 'build 'mpi-setup
           ,%openmpi-setup)
         (replace 'check
           (lambda* (#:key tests? inputs outputs #:allow-other-keys)
             (when tests?
               (setenv "HOME" (getcwd))
               (add-installed-pythonpath inputs outputs)
               (with-directory-excursion "tests"
                 (for-each (lambda (dir)
                             (with-directory-excursion dir
                               (invoke "./run_all.sh")))
                           '("common" "dolfin"))))))
         ;; Disable the sanity check, which fails with the following error:
         ;;
         ;;   ...checking requirements: ERROR: vedo==2022.2.0 DistributionNotFound(Requirement.parse('vtk<9.1.0'), {'vedo'})
         (delete 'sanity-check))))
             (substitute* "pyproject.toml"
               (("\"vtk\",") "")))))))
    (native-inputs
     (list pkg-config
           python-pkgconfig))
           python-pkgconfig
           python-setuptools
           python-wheel))
    (propagated-inputs
     (list fenics
           python-deprecated
     (list python-deprecated
           python-matplotlib
           python-numpy
           python-pygments
           vtk))
    (home-page "https://github.com/marcomusy/vedo")
    (synopsis