~ruther/guix-local

f09b06229d421a7b1bec78b1cd3d40d7c80285bf — Sharlatan Hellseher a month ago 592b53a 
gnu: python-qutip: Update to 5.2.2.

* gnu/packages/python-science.scm (python-qutip): Update to 5.2.2.
[arguments] <test-flags>: Rework skipped/ignored tests.
<phases>: Use default 'check; add 'remove-local-source.
[propagated-inputs]: Add python-cvxopt, python-cvxpy, python-mpi4py,
python-mpmath, and python-tqdm.
[native-inputs]: Remove python-numpy, python-packaging, python-scipy,
and python-wheel; add python-pytest-rerunfailures.

Change-Id: I1ee08658e6a7c6ef2c6b42b9d121113dedad04f7
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
patch browse .tar.gz 
1 files changed, 25 insertions(+), 28 deletions(-)

M gnu/packages/python-science.scm

M gnu/packages/python-science.scm => gnu/packages/python-science.scm +25 -28
@@ 2658,13 2658,13 @@ factorization routine for quasi-definite linear system.")
(define-public python-qutip
  (package
    (name "python-qutip")
    (version "5.2.0")
    (version "5.2.2")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "qutip" version))
       (sha256
        (base32 "0yjv04q68jqh769shlsm31zzg2v23r64rbzs8gawpj12pip1h9cp"))
        (base32 "0rl4piaj13g7g5i9wgdqc60q59dhk4lr34hw8v7xgnw6wkhiflb2"))
       (modules '((guix build utils)))
       (snippet
        #~(begin


@@ 2683,35 2683,32 @@ factorization routine for quasi-definite linear system.")
    (build-system pyproject-build-system)
    (arguments
     (list
      ;; tests: 15987 passed, 167 skipped, 95 deselected, 5 xfailed, 71 warnings
      #:test-flags
      #~(list "-m" "not flaky and not slow" ;; Ignore flaky and slow tests.
              ;; All tests below fail with:
              ;; _flapack.error: (lrwork>=max(24*n,1)||lrwork==-1) failed for
              ;; 10th keyword lrwork: zheevr:lrwork=1
              "-k" (string-append
                    "not " (string-join
                            (list "test_dicke_function_trace"
                                  "test_create"
                                  "test_terminator"
                                  "test_krylov"
                                  "test_krylovsolve")
                            " and not ")))
      #~(list "-m" "not flaky and not slow"      ;ignore flaky and slow tests
              "--ignore=tests/solver/")          ;depends on loky
      #:phases
      #~(modify-phases %standard-phases
          (replace 'check
            ;; Run tests in the output to avoid 'partially imported' errors.
            (lambda* (#:key tests? test-flags #:allow-other-keys)
              (when tests?
                (with-directory-excursion #$output
                  (apply invoke "pytest" "-vv" test-flags))))))))
    (propagated-inputs (list python-numpy python-packaging python-scipy))
    (native-inputs (list python-cython
                         python-numpy
                         python-packaging
                         python-pytest
                         python-scipy
                         python-setuptools
                         python-wheel))
          (add-before 'check 'remove-local-source
            (lambda _
              (copy-recursively "qutip/tests" "tests")
              (delete-file-recursively "qutip"))))))
    (native-inputs
     (list python-cython
           python-pytest
           python-pytest-rerunfailures
           python-setuptools))
    (propagated-inputs
     (list python-numpy
           python-packaging
           python-scipy
           ;; [optional]
           python-cvxopt
           python-cvxpy
           ;; python-loky       ;not packaged yet in Guix
           python-mpi4py
           python-mpmath
           python-tqdm))
    (home-page "https://qutip.org")
    (synopsis "Quantum Toolbox in Python")
    (description