From dcca820951aed7b734b1524db0d7ab9f35db68df Mon Sep 17 00:00:00 2001
From: Nicolas Graves <ngraves@ngraves.fr>
Date: Sat, 10 Jan 2026 20:46:50 +0100
Subject: [PATCH] gnu: scregseg: Skip 'sanity-check phase.

* gnu/packages/bioinformatics.scm (scregseg)
[arguments]<#:phases>: Skip 'sanity-check phase.
[native-inputs]: Add python-pytest.

Change-Id: If28faf66025e79210850080a18b8ce35d9ec6504
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
---
 gnu/packages/bioinformatics.scm | 6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6793aeacf881e83ca349609742130bbfae8db45b..1b96d112e7c0e3e4e9308589a85909df336927a8 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -24406,9 +24406,13 @@ populations.")
          (add-after 'unpack 'compatibility
            (lambda _
              (substitute* "src/scregseg/_utils.pyx"
-               (("np.float") "float")))))))
+               (("np.float") "float"))))
+         ;; XXX: python-notebook and python-jupyter-client versions
+         ;; are incompatible.
+         (delete 'sanity-check))))
     (native-inputs
      (list python-cython
+           python-pytest
            python-setuptools))
     (propagated-inputs
      (list python-scikit-learn-1.6