M gnu/local.mk => gnu/local.mk +1 -0
@@ 822,6 822,7 @@ dist_patch_DATA = \
%D%/packages/patches/mesa-wayland-egl-symbols-check-mips.patch \
%D%/packages/patches/metabat-remove-compilation-date.patch \
%D%/packages/patches/metabat-fix-compilation.patch \
+ %D%/packages/patches/metabat-fix-boost-issue.patch \
%D%/packages/patches/mhash-keygen-test-segfault.patch \
%D%/packages/patches/mingw-w64-5.0rc2-gcc-4.9.3.patch \
%D%/packages/patches/mpc123-initialize-ao.patch \
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +2 -1
@@ 3480,7 3480,8 @@ form of assemblies or reads.")
(base32
"0ll00l81aflscgggs5nfhj12cbvdiz3gg7f7n5f537a3xhx60vn9"))
(patches (search-patches "metabat-remove-compilation-date.patch"
- "metabat-fix-compilation.patch"))))
+ "metabat-fix-compilation.patch"
+ "metabat-fix-boost-issue.patch"))))
(build-system gnu-build-system)
(arguments
`(#:phases
A gnu/packages/patches/metabat-fix-boost-issue.patch => gnu/packages/patches/metabat-fix-boost-issue.patch +27 -0
@@ 0,0 1,27 @@
+This patch fixes the issue described at
+https://bitbucket.org/berkeleylab/metabat/issues/28/compilation-fail-with-boost-164
+
+diff --git a/src/metabat.h b/src/metabat.h
+index 32ae94c..2292c04 100644
+--- a/src/metabat.h
++++ b/src/metabat.h
+@@ -35,6 +35,7 @@ KSEQ_INIT(gzFile, gzread)
+
+ #include <boost/program_options.hpp>
+ #include <boost/algorithm/string.hpp>
++#include <boost/serialization/array_wrapper.hpp>
+ #include <boost/numeric/ublas/matrix.hpp>
+ #include <boost/math/distributions.hpp>
+ #include <boost/serialization/serialization.hpp>
+diff --git a/src/metabat2.h b/src/metabat2.h
+index 60a9998..19fa815 100644
+--- a/src/metabat2.h
++++ b/src/metabat2.h
+@@ -41,6 +41,7 @@ KSEQ_INIT(gzFile, gzread)
+
+ #include <boost/program_options.hpp>
+ #include <boost/algorithm/string.hpp>
++#include <boost/serialization/array_wrapper.hpp>
+ #include <boost/numeric/ublas/matrix.hpp>
+ #include <boost/numeric/ublas/matrix_sparse.hpp>
+ #include <boost/numeric/ublas/matrix_proxy.hpp>