@@ 3836,6 3836,36 @@ dependencies between GO terms can be implemented and applied.")
;; Any version of the LGPL applies.
(license license:lgpl2.1+)))
+(define-public r-bsgenome
+ (package
+ (name "r-bsgenome")
+ (version "1.38.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BSgenome" version))
+ (sha256
+ (base32
+ "130w0m6q8kkca7gyz1aqj5jjhalwvwi6rk2yvbjrnj4gpnncyrd2"))))
+ (properties
+ `((upstream-name . "BSgenome")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biocgenerics" ,r-biocgenerics)
+ ("r-biostrings" ,r-biostrings)
+ ("r-genomeinfodb" ,r-genomeinfodb)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-iranges" ,r-iranges)
+ ("r-rsamtools" ,r-rsamtools)
+ ("r-rtracklayer" ,r-rtracklayer)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-xvector" ,r-xvector)))
+ (home-page "http://bioconductor.org/packages/BSgenome")
+ (synopsis "Infrastructure for Biostrings-based genome data packages")
+ (description
+ "This package provides infrastructure shared by all Biostrings-based
+genome data packages and support for efficient SNP representation.")
+ (license license:artistic2.0)))
+
(define-public r-qtl
(package
(name "r-qtl")