~ruther/guix-local: gnu: r-mi: Add missing inputs and skip bad test.

c2b7144a80094c5ee53c7382b58d1b24411c7fa0 — Ricardo Wurmus 3 months ago 084ab3b

gnu: r-mi: Add missing inputs and skip bad test.

* gnu/packages/cran.scm (r-mi)[arguments]: Add phase 'skip-bad-tests.
[native-inputs]: Add r-betareg, r-survival, and r-truncnorm.

Change-Id: I662a6f8d43c03ae31254f8b6489791d59dce6d4b

patch browse .tar.gz

1 files changed, 10 insertions(+), 1 deletions(-)

M gnu/packages/cran.scm

M gnu/packages/cran.scm => gnu/packages/cran.scm +10 -1

@@ 45660,10 45660,19 @@ Models.")
             "133dvhigvqs6qadpf47zxxpgh1j0h2cgch8h88qh9viiw2s0klh6"))))
     (properties `((upstream-name . "mi")))
     (build-system r-build-system)
+    (arguments
+     (list
+      #:phases
+      '(modify-phases %standard-phases
+         (add-after 'unpack 'skip-bad-tests
+           (lambda _
+             ;; Fails with: binary variables must have exactly two response categories
+             (substitute* "tests/missing_variable.R"
+               (("y <- missing_variable\\(x, type = \"binary\"\\)") "")))))))
     (propagated-inputs
      (list r-arm r-matrix))
     (native-inputs
-     (list r-knitr))
+     (list r-betareg r-knitr r-survival r-truncnorm))
     (home-page "http://www.stat.columbia.edu/~gelman/")
     (synopsis "Missing data imputation and model checking")
     (description