~ruther/guix-local

b6b35e29665187345bb34a92b37466bfe25e8be3 — Ricardo Wurmus 1 year, 2 months ago 17f081f
gnu: Add r-pizzarr.

* gnu/packages/bioinformatics.scm (r-pizzarr): New variable.

Change-Id: Ia922dfb4ef418ecd4317ce6127b88ecf91bd2cc7
1 files changed, 27 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +27 -0
@@ 1342,6 1342,33 @@ gene regulations.")
within this package are the 3000 bone marrow cells used for vignettes.")
      (license license:gpl3))))

(define-public r-pizzarr
  (let ((commit "7b3fd727a4ce7cb0fe8e443b971c5f63e18df991")
        (revision "1"))
    (package
      (name "r-pizzarr")
      (version (git-version "0.1.0" revision commit))
      (source
       (origin
         (method git-fetch)
         (uri (git-reference
               (url "https://github.com/keller-mark/pizzarr")
               (commit commit)))
         (file-name (git-file-name name version))
         (sha256
          (base32 "0xwb7cl52nzwgh0xiz8cda27qy5q45cqna5k40fngwj4mrbfm383"))))
      (properties `((upstream-name . "pizzarr")))
      (build-system r-build-system)
      (propagated-inputs (list r-jsonlite r-memoise r-qs r-r6 r-stringr))
      (native-inputs (list r-pbapply r-testthat r-vcr))
      (home-page "https://github.com/keller-mark/pizzarr")
      (synopsis "Slice into Zarr arrays in R")
      (description
       "This package provides an implementation of chunked, compressed,
N-dimensional arrays for R, Zarr specification version 2 (2024)
<doi:10.5281/zenodo.11320255>.")
      (license license:expat))))

(define-public r-rhtslib12
  (let ((commit "ee186daf04876969c7f31c16a0e0fda8e7c16a30")
        (revision "1"))