~ruther/guix-local

aeb5fd0a24d3c7468cd461db2d25dd74f1cade8c — Kjartan Oli Agustsson 1 year, 1 month ago 20ee2f5 
gnu: checkm: Use pyproject-build-system.

* gnu/packages/bioinformatics.scm (checkm): Run guix style.
[build-system]: Use pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I7d3214c29a7e2b3a6065336632f534a2c4cefbbc
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
patch browse .tar.gz .zip 
1 files changed, 10 insertions(+), 12 deletions(-)

M gnu/packages/bioinformatics.scm

M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +10 -12
@@ 21637,19 21637,17 @@ sequence for paired-ended data, for which this information is not available.")
       (method url-fetch)
       (uri (pypi-uri "checkm-genome" version))
       (sha256
        (base32
         "0i2nnki639hgjag17wlva2x0ymn37b4krqsf6akxddykhfbkdnkz"))))
    (build-system python-build-system)
        (base32 "0i2nnki639hgjag17wlva2x0ymn37b4krqsf6akxddykhfbkdnkz"))))
    (build-system pyproject-build-system)
    (arguments
     `(#:tests? #f ; Some tests fail for unknown reasons.
       #:phases
       (modify-phases %standard-phases
         (add-before 'check 'set-HOME
           (lambda _
             (setenv "HOME" "/tmp"))))))
    (inputs
     (list python-dendropy python-matplotlib python-numpy python-pysam
           python-scipy))
     `(#:tests? #f ;Some tests fail for unknown reasons.
       #:phases (modify-phases %standard-phases
                  (add-before 'check 'set-HOME
                    (lambda _
                      (setenv "HOME" "/tmp"))))))
    (inputs (list python-dendropy python-matplotlib python-numpy python-pysam
                  python-scipy))
    (native-inputs (list python-setuptools python-wheel))
    (home-page "https://ecogenomics.github.io/CheckM/")
    (synopsis "Assess the quality of putative genome bins")
    (description