~ruther/guix-local

a8fff63daa9a4dababac30826423d72e01a7b6c0 — Ricardo Wurmus 4 years ago b15a525
gnu: Add python-mygene.

* gnu/packages/bioinformatics.scm (python-mygene): New variable.
1 files changed, 21 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +21 -0
@@ 10340,6 10340,27 @@ single-cell RNA-seq data.")
API services.")
    (license license:bsd-3)))

(define-public python-mygene
  (package
    (name "python-mygene")
    (version "3.2.2")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "mygene" version))
       (sha256
        (base32 "1snszwdgfygchxshcbry3b5pbcw3g1isp8dw46razxccqaxwlag7"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-biothings-client" ,python-biothings-client)))
    (home-page "https://github.com/biothings/mygene.py")
    (synopsis "Python Client for MyGene.Info services.")
    (description "MyGene.Info provides simple-to-use REST web services
to query/retrieve gene annotation data.  It's designed with simplicity
and performance emphasized.  Mygene is a Python wrapper to access
MyGene.Info services.")
    (license license:bsd-3)))

;; We cannot use the latest commit because it requires Java 9.
(define-public java-forester
  (let ((commit "86b07efe302d5094b42deed9260f719a4c4ac2e6")