@@ 7841,6 7841,46 @@ includes software to
")
(license license:cc0))))
+(define-public gdc-client
+ (package
+ (name "gdc-client")
+ (version "1.6.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/NCI-GDC/gdc-client.git")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0cagawlzjwj3wam10lv64xgbfx4zcnzxi5sjpsdhq7rn4z24mzc2"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'relax-requirements
+ (lambda _
+ (substitute* "requirements.txt"
+ (("==") ">=")))))))
+ (inputs
+ `(("python-cryptography" ,python-cryptography)
+ ("python-intervaltree" ,python-intervaltree)
+ ("python-jsonschema" ,python-jsonschema)
+ ("python-lxml" ,python-lxml)
+ ("python-ndg-httpsclient" ,python-ndg-httpsclient)
+ ("python-progressbar2" ,python-progressbar2)
+ ("python-pyasn1" ,python-pyasn1)
+ ("python-pyopenssl" ,python-pyopenssl)
+ ("python-pyyaml" ,python-pyyaml)
+ ("python-requests" ,python-requests)
+ ("python-termcolor" ,python-termcolor)))
+ (home-page "https://gdc.nci.nih.gov/access-data/gdc-data-transfer-tool")
+ (synopsis "GDC data transfer tool")
+ (description "The gdc-client provides several convenience functions over
+the GDC API which provides general download/upload via HTTPS.")
+ (license license:asl2.0)))
+
(define-public vsearch
(package
(name "vsearch")