From 9f1f80e24b23bc3d5f8b7cbe2196b31672b539cb Mon Sep 17 00:00:00 2001 From: Navid Afkhami Date: Fri, 1 Sep 2023 20:45:11 +0000 Subject: [PATCH] gnu: Add r-strawr. * gnu/packages/cran.scm (r-strawr): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/cran.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 4ec6b802ff067979f1f5df5405704dedbed32c1e..b6a01a99b088e1a34b97e40391875803760f90e0 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -8287,6 +8287,29 @@ graphing packages. This package also forms the statistical processing backend for ggstatsplot.") (license license:gpl3))) +(define-public r-strawr + (package + (name "r-strawr") + (version "0.0.91") + (source (origin + (method url-fetch) + (uri (cran-uri "strawr" version)) + (sha256 + (base32 + "1nbcn20g3f3f5x9sscj3020n5h4iaphr70s90n2fz31vc4snzq2m")))) + (properties `((upstream-name . "strawr"))) + (build-system r-build-system) + (inputs (list curl zlib)) + (propagated-inputs (list r-rcpp)) + (home-page "https://github.com/aidenlab/straw/tree/master/R") + (synopsis "Fast implementation of reading / dumping of .hic files") + (description + "This package provides an API for efficient @file{.hic} file data +extraction with programmatic matrix access. It doesn't store the pointer data +for all the matrices, only the one queried, and currently it only supports +matrices.") + (license license:expat))) + (define-public r-stringdist (package (name "r-stringdist")