~ruther/guix-local

988c730a9a2b8ca836b9aa24db996c6a1f1e2a10 — Sharlatan Hellseher 2 years ago f730bae
gnu: python-astroquery: Update to 0.4.7.

* gnu/packages/astronomy.scm (python-astroquery): Update to 0.4.7.
[arguments] <#:test-flags>: Disable one failing test.
<#:phases>: Remove 'prepare-test-environment phase. Add custom 'check
phase.

Change-Id: I159a9d765de7f8de00c4bf226febfc90d2ba6c76
1 files changed, 19 insertions(+), 16 deletions(-)

M gnu/packages/astronomy.scm
M gnu/packages/astronomy.scm => gnu/packages/astronomy.scm +19 -16
@@ 1739,34 1739,37 @@ celestial-to-terrestrial coordinate transformations.")
(define-public python-astroquery
  (package
    (name "python-astroquery")
    (version "0.4.6")
    (version "0.4.7")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "astroquery" version))
       (sha256
        (base32 "1vhkzsqlgn3ji5by2rdf2gwklhbyzvpzb1iglalhqjkkrdaaaz1h"))))
        (base32 "1jbyfhqk74wsdjxzqi0hcrgc7ha4q8cyjx96nv6w9bjg1b5vlzq4"))))
    (build-system pyproject-build-system)
    (arguments
     (list
      #:test-flags
      #~(list "--pyargs" "astroquery"
              "-m" "not remote_data")
              "-m" "not remote_data"
              ;; Some tests failed with parallel run, see
              ;; <https://github.com/astropy/astroquery/issues/2968>.
              ;; "-n" "auto"
              "-k" (string-append
                    ;; Failed: DID NOT RAISE <class
                    ;; 'astropy.utils.exceptions.AstropyDeprecationWarning'>
                    "not test_raises_deprecation_warning"))
      #:phases
      #~(modify-phases %standard-phases
          (add-before 'check 'prepare-test-environment
            (lambda _
              (setenv "HOME" (getcwd)) ; some tests need a writable home
              ;; To solve pytest/conftest issue. Pytest tries to load all
              ;; files with word 'test' in them.
              ;;
              ;; ImportError while loading conftest ...
              ;; _pytest.pathlib.ImportPathMismatchError: ...
              ;;
              (call-with-output-file "pytest.ini"
                (lambda (port)
                  (format port "[pytest]
python_files = test_*.py"))))))))
          (replace 'check
            (lambda* (#:key tests? test-flags #:allow-other-keys)
              (when tests?
                ;; Some tests require write access to $HOME.
                (setenv "HOME" "/tmp")
                ;; Step out of the source directory to avoid interference;
                ;; we want to run the installed code with extensions etc.
                (with-directory-excursion "/tmp"
                  (apply invoke "pytest" "-v" test-flags))))))))
    (propagated-inputs
     (list python-astropy
           python-beautifulsoup4