@@ 522,6 522,39 @@ into separate processes; and more.")
(inputs
`(("python2-numpy" ,python2-numpy)))))
+(define-public bpp-core
+ ;; The last release was in 2014 and the recommended way to install from source
+ ;; is to clone the git repository, so we do this.
+ ;; http://biopp.univ-montp2.fr/wiki/index.php/Main_Page
+ (let ((commit "7d8bced0d1a87291ea8dd7046b7fb5ff9c35c582"))
+ (package
+ (name "bpp-core")
+ (version (string-append "2.2.0-1." (string-take commit 7)))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "http://biopp.univ-montp2.fr/git/bpp-core")
+ (commit commit)))
+ (file-name (string-append name "-" version "-checkout"))
+ (sha256
+ (base32
+ "10djsq5vlnkilv436gnmh4irpk49v29pa69r6xiryg32xmvn909j"))))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:parallel-build? #f))
+ (inputs
+ `(("gcc" ,gcc-5))) ; Compilation of bpp-phyl fails with GCC 4.9 so we
+ ; compile all of the bpp packages with GCC 5.
+ (home-page "http://biopp.univ-montp2.fr")
+ (synopsis "C++ libraries for Bioinformatics")
+ (description
+ "Bio++ is a set of C++ libraries for Bioinformatics, including sequence
+analysis, phylogenetics, molecular evolution and population genetics. It is
+Object Oriented and is designed to be both easy to use and computer efficient.
+Bio++ intends to help programmers to write computer expensive programs, by
+providing them a set of re-usable tools.")
+ (license license:cecill-c))))
+
(define-public blast+
(package
(name "blast+")