@@ 4152,3 4152,30 @@ analysis using several of the Bioconductor packages. It is intended to be
deployed as a centralized bioinformatics resource for use by many users.
Currently only Affymetrix oligonucleotide analysis is supported.")
(license license:gpl2+)))
+
+(define-public r-zfpkm
+ (package
+ (name "r-zfpkm")
+ (version "1.4.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "zFPKM" version))
+ (sha256
+ (base32
+ "0rvfrjxxvfng9fxxn316gm96v4rahx62vlk3axr2bzjbi1r4s8v5"))))
+ (properties `((upstream-name . "zFPKM")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-checkmate" ,r-checkmate)
+ ("r-dplyr" ,r-dplyr)
+ ("r-ggplot2" ,r-ggplot2)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)
+ ("r-tidyr" ,r-tidyr)))
+ (home-page "https://github.com/ronammar/zFPKM/")
+ (synopsis "Functions to facilitate zFPKM transformations")
+ (description
+ "This is a package to perform the zFPKM transform on RNA-seq FPKM data.
+This algorithm is based on the publication by Hart et al., 2013 (Pubmed ID
+24215113).")
+ (license license:gpl3)))