~ruther/guix-local

928e9aa236e665572a3564a4da76358d5700dbab — Ricardo Wurmus 3 years ago a599720
gnu: Add r-shinymethyl.

* gnu/packages/bioconductor.scm (r-shinymethyl): New variable.
1 files changed, 27 insertions(+), 0 deletions(-)

M gnu/packages/bioconductor.scm
M gnu/packages/bioconductor.scm => gnu/packages/bioconductor.scm +27 -0
@@ 8800,6 8800,33 @@ sequence motif occurrences across a large set of sequences centred at a common
reference point and sorted by a user defined feature.")
    (license license:gpl3+)))

(define-public r-shinymethyl
  (package
    (name "r-shinymethyl")
    (version "1.34.0")
    (source (origin
              (method url-fetch)
              (uri (bioconductor-uri "shinyMethyl" version))
              (sha256
               (base32
                "1xbadc4xszcqh211r8z0wp417f17aczz834icli17mcsl996ln3a"))))
    (properties `((upstream-name . "shinyMethyl")))
    (build-system r-build-system)
    (propagated-inputs
     (list r-biocgenerics
           r-illuminahumanmethylation450kmanifest
           r-matrixstats
           r-minfi
           r-rcolorbrewer
           r-shiny))
    (native-inputs (list r-knitr))
    (home-page "https://bioconductor.org/packages/shinyMethyl")
    (synopsis "Interactive visualization for Illumina methylation arrays")
    (description
     "This package provides an interactive tool for visualizing Illumina
methylation array data.  Both the 450k and EPIC array are supported.")
    (license license:artistic2.0)))

(define-public r-shortread
  (package
    (name "r-shortread")