~ruther/guix-local

9101c7bf8eb63762b2231a31a87d830c0a6b8e52 — Felix Gruber 5 years ago a6c30da
gnu: clipper: Disable non-deterministic test.

This test fails/succeeds non-deterministically.

* gnu/packages/bioinformatics.scm (clipper)[arguments]: Disable
  non-deterministic test test_get_FDR_cutoff_mean.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
1 files changed, 8 insertions(+), 1 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +8 -1
@@ 22,6 22,7 @@
;;; Copyright © 2021 Tim Howes <timhowes@lavabit.com>
;;; Copyright © 2021 Hong Li <hli@mdc-berlin.de>
;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com>
;;; Copyright © 2021 Felix Gruber <felgru@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;


@@ 2363,7 2364,13 @@ databases.")
             (let ((out (assoc-ref outputs "out")))
               (for-each make-file-writable
                         (find-files out "\\.gz$"))
               #t))))))
               #t)))
         (add-after 'unpack 'disable-nondeterministic-test
           (lambda _
             ;; This test fails/succeeds non-deterministically.
             (substitute* "clipper/test/test_call_peak.py"
               (("test_get_FDR_cutoff_mean") "_test_get_FDR_cutoff_mean"))
             #t)))))
    (inputs
     `(("htseq" ,htseq)
       ("python-pybedtools" ,python-pybedtools)