~ruther/guix-local

8b7bce740d507d544b6634b0f60be9450b36c5fc — Ricardo Wurmus 10 years ago 555e339
gnu: Add AnnotationDbi.

* gnu/packages/bioinformatics.scm (r-annotationdbi): New variable.
1 files changed, 27 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +27 -0
@@ 3488,6 3488,33 @@ manipulating genomic intervals and variables defined along a genome.")
on Bioconductor or which replace R functions.")
    (license license:artistic2.0)))

(define-public r-annotationdbi
  (package
    (name "r-annotationdbi")
    (version "1.32.2")
    (source (origin
              (method url-fetch)
              (uri (bioconductor-uri "AnnotationDbi" version))
              (sha256
               (base32
                "08ncdjvq0l44kqyiv32kn9wnbw1xgfb6qjfzfbjpqrcfp1jygz9j"))))
    (properties
     `((upstream-name . "AnnotationDbi")))
    (build-system r-build-system)
    (propagated-inputs
     `(("r-biobase" ,r-biobase)
       ("r-biocgenerics" ,r-biocgenerics)
       ("r-dbi" ,r-dbi)
       ("r-iranges" ,r-iranges)
       ("r-rsqlite" ,r-rsqlite)
       ("r-s4vectors" ,r-s4vectors)))
    (home-page "http://bioconductor.org/packages/AnnotationDbi")
    (synopsis "Annotation database interface")
    (description
     "This package provides user interface and database connection code for
annotation data packages using SQLite data storage.")
    (license license:artistic2.0)))

(define-public r-qtl
 (package
  (name "r-qtl")