~ruther/guix-local

89f40c5e4eea65cf93627fdd64d667b06598226f — Ricardo Wurmus 9 years ago 1a1931f
gnu: Add r-gostats.

* gnu/packages/bioinformatics.scm (r-gostats): New variable.
1 files changed, 30 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +30 -0
@@ 5278,6 5278,36 @@ Enrichment Analysis} (GSEA).")
analysis.")
    (license license:artistic2.0)))

(define-public r-gostats
  (package
    (name "r-gostats")
    (version "2.38.1")
    (source
     (origin
       (method url-fetch)
       (uri (bioconductor-uri "GOstats" version))
       (sha256
        (base32
         "1hhw6vqr8f3g4jzq0v8f2za0r1h117j5s6av87zxs41cv7dq1wb3"))))
    (properties `((upstream-name . "GOstats")))
    (build-system r-build-system)
    (propagated-inputs
     `(("r-annotate" ,r-annotate)
       ("r-annotationdbi" ,r-annotationdbi)
       ("r-annotationforge" ,r-annotationforge)
       ("r-biobase" ,r-biobase)
       ("r-category" ,r-category)
       ("r-go-db" ,r-go-db)
       ("r-graph" ,r-graph)
       ("r-rbgl" ,r-rbgl)))
    (home-page "http://bioconductor.org/packages/GOstats")
    (synopsis "Tools for manipulating GO and microarrays")
    (description
     "This package provides a set of tools for interacting with GO and
microarray data.  A variety of basic manipulation tools for graphs, hypothesis
testing and other simple calculations.")
    (license license:artistic2.0)))

(define-public vsearch
  (package
    (name "vsearch")