~ruther/guix-local

74443c30f3e20655a046c0d3ea236822ef130968 — Navid Afkhami 3 years ago c348b1b
gnu: Add python-mudata.

* gnu/packages/bioinformatics.scm (python-mudata): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
1 files changed, 26 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +26 -0
@@ 3357,6 3357,32 @@ It provides convenience functions to load and visualize factor models trained
with MOFA+ in Python.")
      (license license:expat))))

(define-public python-mudata
  (package
    (name "python-mudata")
    (version "0.2.3")
    (source (origin
              (method git-fetch)
              (uri (git-reference
                    (url "https://github.com/scverse/mudata")
                    (commit (string-append "v" version))))
              (file-name (git-file-name name version))
              (sha256
               (base32
                "02h0k1q57589r0hdv8nwg1vk7g2ljvn5g66c47fy5gdilbm3gjws"))))
    (build-system pyproject-build-system)
    (propagated-inputs
     (list python-anndata python-h5py python-pandas))
    (native-inputs
     (list python-flit-core python-numpy python-pytest python-zarr))
    (home-page "https://github.com/scverse/mudata")
    (synopsis "Python package for multi-omics data analysis")
    (description
     "Mudata is a Python package for multi-omics data analysis.
It is designed to provide functionality to load, process, and store multimodal
omics data.")
    (license license:bsd-3)))

(define-public python-pyega3
  (package
    (name "python-pyega3")