From 71d60494f55ad1b513d5a57b9c7105c1e3fbb1b3 Mon Sep 17 00:00:00 2001 From: Andreas Enge Date: Thu, 23 Oct 2025 21:17:47 +0200 Subject: [PATCH] gnu: Remove samtools-1.14. * gnu/packages/bioinformatics.scm (samtools-1.14): Delete variable. Change-Id: I68e8e3ad05841d300897d830f9bcd7fa73c68adc --- gnu/packages/bioinformatics.scm | 20 -------------------- 1 file changed, 20 deletions(-) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f34347af301d82d4ecccf622631463808186a8c0..a1c29347ea4c0460b1a4786a7157d85987407df6 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -11167,26 +11167,6 @@ variant calling (in conjunction with bcftools), and a simple alignment viewer.") (license license:expat))) -(define-public samtools-1.14 - (package/inherit samtools - (version "1.14") - (source - (origin - (method url-fetch) - (uri - (string-append "mirror://sourceforge/samtools/samtools/" - version "/samtools-" version ".tar.bz2")) - (sha256 - (base32 - "0x3xdda78ac5vx66b3jdsv9sfhyz4npl4znl1zbaf3lbm6xdlhck")) - (modules '((guix build utils))) - (snippet '(begin - ;; Delete bundled htslib. - (delete-file-recursively "htslib-1.14"))))) - (native-inputs (list pkg-config)) - (inputs - (list htslib-1.14 ncurses perl python zlib)))) - (define-public samtools-0.1 ;; This is the most recent version of the 0.1 line of samtools. The input ;; and output formats differ greatly from that used and produced by samtools