~ruther/guix-local

669f0eaed6310233295fbd0a077afc9ce054c6ab — Navid Afkhami 3 years ago 29ccd7c
gnu: Add r-dtmm.

* gnu/packages/bioinformatics.scm (r-dtmm): New variable.
1 files changed, 26 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +26 -0
@@ 14644,6 14644,32 @@ visualize the results within R framework.  The disgenet2r package is designed
to retrieve data from DisGeNET v6.0 (Jan, 2019).")
      (license license:expat))))

(define-public r-dtmm
  (let ((commit "3a553b1e17d27d90a496d2e23e98e5dfe4abc266")
        (revision "1"))
    (package
      (name "r-dtmm")
      (version (git-version "0.1.0" revision commit))
      (source (origin
                (method git-fetch)
                (uri (git-reference
                      (url "https://github.com/MaStatLab/DTMM")
                      (commit commit)))
                (file-name (git-file-name name version))
                (sha256
                 (base32
                  "19279wafqfs9gk9489f8zsp52qcdb0mkxgvqszq4i733ckr2mmkk"))))
      (properties `((upstream-name . "DTMM")))
      (build-system r-build-system)
      (propagated-inputs (list r-ape r-rcpp r-rcpparmadillo))
      (home-page "https://github.com/MaStatLab/DTMM")
      (synopsis "Dirichlet-tree multinomial mixtures")
      (description
       "This package lets you perform unsupervised clustering of amplicon
sequencing data in microbiome studies with the Dirichlet-tree Multinomial
Mixtures.")
      (license license:cc0))))

(define-public r-dyngen
  (package
    (name "r-dyngen")