~ruther/guix-local

64714dcd176dc73bca85bb218be8f6c178fc4ac2 — Sharlatan Hellseher 2 months ago 940fd33
gnu: macs-3: Update to 3.0.3.

* gnu/packages/bioinformatics.scm (macs-3): Update to 3.0.3.
[arguments, properties]: Drop all.
[native-inputs]: Remove python-wheel.

Change-Id: Ida52036ce3305d1db67f27f98cbc0d48c1f9650a
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
1 files changed, 2 insertions(+), 14 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +2 -14
@@ 9956,7 9956,7 @@ sequencing tag position and orientation.")
(define-public macs-3
  (package
    (name "macs")
    (version "3.0.2")
    (version "3.0.3")
    (source (origin
              (method git-fetch)
              (uri (git-reference


@@ 9966,19 9966,8 @@ sequencing tag position and orientation.")
              (file-name (git-file-name name version))
              (sha256
               (base32
                "0x5iz6iq694z3m9zx7zdw0js2l2l40lf1as9k3jy0q4mvz02a3aw"))))
    (properties
     '((updater-extra-inputs . ("zlib"))))
                "08hi0a2a0md9gfg7jc75wxv69rggv2yqfd1hyrg4mi5bhi712m0v"))))
    (build-system pyproject-build-system)
    (arguments
     (list
      #:phases
      '(modify-phases %standard-phases
         ;; FIXME: our version of numpy is a little too old.
         (add-after 'unpack 'relax-requirements
           (lambda _
             (substitute* '("pyproject.toml" "requirements.txt" "setup.py")
               (("numpy.*=1.25") "numpy>=1.23")))))))
    (propagated-inputs
     (list python-cykhash
           python-hmmlearn


@@ 9989,7 9978,6 @@ sequencing tag position and orientation.")
     (list python-cython
           python-pytest
           python-setuptools
           python-wheel
           zlib))
    (home-page "https://github.com/macs3-project/MACS")
    (synopsis "Model based analysis for ChIP-Seq data")