~ruther/guix-local

5fcf8b1ea7968e74b650e93b32d577ed8c483c96 — Sharlatan Hellseher 2 months ago ffbac2a
gnu: python-pyreadstat: Update to 1.3.2.

* gnu/packages/statistics.scm (python-pyreadstat): Update to 1.3.2.
[arguments] <test-backend, test-flags>: Move custom 'check phase logic here.
<phases>: Remove 'change-home-dir; add 'pre-check.
[inputs]: Add readstat.
[propagated-inputs]: Add python-narwhals-minimal and python-numpy.

* gnu/packages/patches/python-pyreadstat-link-libiconv.patch: Refresh
patch for 1.3.2.

Change-Id: I478c67cb48574178483b6dfe97b5ed7bf9b4c783
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
2 files changed, 29 insertions(+), 25 deletions(-)

M gnu/packages/patches/python-pyreadstat-link-libiconv.patch
M gnu/packages/statistics.scm
M gnu/packages/patches/python-pyreadstat-link-libiconv.patch => gnu/packages/patches/python-pyreadstat-link-libiconv.patch +4 -3
@@ 2,11 2,12 @@ To ensure libiconv can be found by Guix, we need to link the library.

--- a/setup.py
+++ b/setup.py
@@ -81,8 +81,7 @@ else:
@@ -109,9 +109,7 @@ if os.name == 'nt':
 else:
     libraries.extend(["m", "z"])
     _platform = sys.platform
     # Mac: iconv needs to be linked statically
-    if _platform.lower().startswith("darwin"):
-    # Mac and ubuntu: iconv needs to be linked statically
-    if _platform.lower().startswith("darwin") or (is_ubuntu() and is_python_lt_14()):
-        libraries.append("iconv")
+    libraries.append("iconv")
 

M gnu/packages/statistics.scm => gnu/packages/statistics.scm +25 -22
@@ 3479,42 3479,45 @@ files, including Rmarkdown files.")
(define-public python-pyreadstat
  (package
    (name "python-pyreadstat")
    (version "1.2.4")
    (version "1.3.2")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/Roche/pyreadstat")
             (commit (string-append "v" version))))
              (url "https://github.com/Roche/pyreadstat")
              (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32 "0zysrzixvqw2lwwykxqg5yj8a0zyv5s2bmk22x30f4rj2hgvq1pv"))
        (base32 "01b7zwvfl46sra0kvdvs19ggx150p4x7pkwl73ar2jda315kjfr4"))
       (patches (search-patches "python-pyreadstat-link-libiconv.patch"))))
    (build-system pyproject-build-system)
    (arguments
     (list
      ;; tests: 92 passed
      #:test-backend #~'custom
      ;; The source also contains tests/test_version.py which checks the
      ;; version in __init__.py against the one in setup.py. Since this
      ;; requires texlive dependencies to run and is also not mentioned in
      ;; how_to_test.md, this test is skipped.
      #:test-flags #~(list "tests/test_basic.py")
      #:phases
      #~(modify-phases %standard-phases
          (add-before 'check 'change-home-dir
          (add-before 'check 'pre-check
            (lambda _
              ;; test_sav_expand and test_sav_write_basic_expanduser need a
              ;; home directory with write permissions.
              (setenv "HOME" "/tmp")))
          (replace 'check
            (lambda* (#:key tests? #:allow-other-keys)
              (when tests?
                ;; The source also contains tests/test_version.py
                ;; which checks the version in __init__.py against the
                ;; one in setup.py. Since this requires texlive
                ;; dependencies to run and is also not mentioned in
                ;; how_to_test.md, this test is skipped.
                (invoke "python" "tests/test_basic.py")))))))
    (propagated-inputs (list python-pandas))
    (inputs (list libiconv zlib))
    (native-inputs (list python-cython python-setuptools))
              (setenv "HOME" "/tmp"))))))
    (native-inputs
     (list python-cython
           python-setuptools))
    (inputs
     (list libiconv
           readstat
           zlib))
    (propagated-inputs
     (list python-narwhals-minimal
           python-pandas
           python-numpy))
    (home-page "https://github.com/Roche/pyreadstat")
    (synopsis
     "Read and write SAS, SPSS and Stata files into/from Pandas DataFrames")
    (synopsis "Read and write SAS, SPSS and Stata files into/from Pandas DataFrames")
    (description
     "This Python package can be used to read and write SAS, SPSS and Stata
files into/from Pandas DataFrames.  It is a wrapper around the C library