~ruther/guix-local

5f96f30f5dc33d421f5a5eae85c9ad221a3cbd6f — Ricardo Wurmus 8 years ago a71fd67
gnu: Add r-interactivedisplaybase.

* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): New variable.
1 files changed, 24 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +24 -0
@@ 9231,6 9231,30 @@ distributional differences between lanes (e.g., sequencing depth):
global-scaling and full-quantile normalization.")
    (license license:artistic2.0)))

(define-public r-interactivedisplaybase
  (package
    (name "r-interactivedisplaybase")
    (version "1.14.0")
    (source
     (origin
       (method url-fetch)
       (uri (bioconductor-uri "interactiveDisplayBase" version))
       (sha256
        (base32
         "12f6ap4bl3h2iwwhg8i3r9a7yyd28d8i5lb3fj1vnfvjs762r7r7"))))
    (properties
     `((upstream-name . "interactiveDisplayBase")))
    (build-system r-build-system)
    (propagated-inputs
     `(("r-biocgenerics" ,r-biocgenerics)
       ("r-shiny" ,r-shiny)))
    (home-page "http://bioconductor.org/packages/interactiveDisplayBase")
    (synopsis "Base package for web displays of Bioconductor objects")
    (description
     "This package contains the basic methods needed to generate interactive
Shiny-based display methods for Bioconductor objects.")
    (license license:artistic2.0)))

(define htslib-for-sambamba
  (let ((commit "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5"))
    (package