~ruther/guix-local

5c9d15055f501868a72148619b5a6db7debd20b8 — Ricardo Wurmus 9 years ago 71676a1
gnu: Add r-affyio.

* gnu/packages/bioinformatics.scm (r-affyio): New variable.
1 files changed, 24 insertions(+), 0 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +24 -0
@@ 8280,3 8280,27 @@ The package contains the original code written by the ISB, and a subset of the
proteowizard library for mzML and mzIdentML.  The netCDF reading code has
previously been used in XCMS.")
    (license license:artistic2.0)))

(define-public r-affyio
  (package
    (name "r-affyio")
    (version "1.44.0")
    (source
     (origin
       (method url-fetch)
       (uri (bioconductor-uri "affyio" version))
       (sha256
        (base32
         "1svsl4mpk06xm505pap913x69ywks99262krag8y4ygpllj7dfyy"))))
    (build-system r-build-system)
    (propagated-inputs
     `(("r-zlibbioc" ,r-zlibbioc)))
    (inputs
     `(("zlib" ,zlib)))
    (home-page "https://github.com/bmbolstad/affyio")
    (synopsis "Tools for parsing Affymetrix data files")
    (description
     "This package provides routines for parsing Affymetrix data files based
upon file format information.  The primary focus is on accessing the CEL and
CDF file formats.")
    (license license:lgpl2.0+)))