~ruther/guix-local

5bef5f4c7cf193100164b369c12bcf0d6ce0d4fd — Ricardo Wurmus 1 year, 11 months ago 16855a1
gnu: r-dyngen: Move to (gnu packages cran).

* gnu/packages/bioinformatics.scm (r-dyngen): Move variable from here...
* gnu/packages/cran.scm (r-dyngen): ...to here.

Change-Id: Id181200fb4cbf268542d93e79e43fdeffa99410d
2 files changed, 39 insertions(+), 39 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/cran.scm
M gnu/packages/bioinformatics.scm => gnu/packages/bioinformatics.scm +0 -39
@@ 16456,45 16456,6 @@ sequencing data in microbiome studies with the Dirichlet-tree Multinomial
Mixtures.")
      (license license:cc0))))

(define-public r-dyngen
  (package
    (name "r-dyngen")
    (version "1.0.5")
    (source
     (origin
       (method url-fetch)
       (uri (cran-uri "dyngen" version))
       (sha256
        (base32
         "095jqn1rd83qm3ayca9hmv6bhlaa2c338020l46vniq8n38kbnra"))))
    (properties `((upstream-name . "dyngen")))
    (build-system r-build-system)
    (propagated-inputs
     (list r-assertthat
           r-dplyr
           r-dynutils
           r-ggplot2
           r-ggraph
           r-ggrepel
           r-gillespiessa2
           r-igraph
           r-lmds
           r-matrix
           r-patchwork
           r-pbapply
           r-purrr
           r-rlang
           r-tibble
           r-tidygraph
           r-tidyr
           r-viridis))
    (home-page "https://github.com/dynverse/dyngen")
    (synopsis "Multi-Modal simulator for single-cell omics analyses")
    (description
     "This package provides a multi-modal simulation engine for studying
dynamic cellular processes at single-cell resolution.")
    (license license:expat)))

;; Needed for r-liana
(define-public r-omnipathr/devel
  (let ((commit "679bb79e319af246a16968d27d64d8d6937a331a")

M gnu/packages/cran.scm => gnu/packages/cran.scm +39 -0
@@ 12617,6 12617,45 @@ contain lags, diffs and missing values.")
    ;; Any GPL version.
    (license license:gpl2+)))

(define-public r-dyngen
  (package
    (name "r-dyngen")
    (version "1.0.5")
    (source
     (origin
       (method url-fetch)
       (uri (cran-uri "dyngen" version))
       (sha256
        (base32
         "095jqn1rd83qm3ayca9hmv6bhlaa2c338020l46vniq8n38kbnra"))))
    (properties `((upstream-name . "dyngen")))
    (build-system r-build-system)
    (propagated-inputs
     (list r-assertthat
           r-dplyr
           r-dynutils
           r-ggplot2
           r-ggraph
           r-ggrepel
           r-gillespiessa2
           r-igraph
           r-lmds
           r-matrix
           r-patchwork
           r-pbapply
           r-purrr
           r-rlang
           r-tibble
           r-tidygraph
           r-tidyr
           r-viridis))
    (home-page "https://github.com/dynverse/dyngen")
    (synopsis "Multi-Modal simulator for single-cell omics analyses")
    (description
     "This package provides a multi-modal simulation engine for studying
dynamic cellular processes at single-cell resolution.")
    (license license:expat)))

(define-public r-dynutils
  (package
    (name "r-dynutils")