From 5ae21052decf267e85b868d45e377658b84d35f2 Mon Sep 17 00:00:00 2001 From: Nicolas Graves Date: Mon, 10 Mar 2025 03:16:37 +0100 Subject: [PATCH] gnu: Add python-snakemake-interface-storage-plugins. * gnu/packages/python-science.scm (python-snakemake-interface-storage-plugins): New variable. Change-Id: Ie74edfdc2535f7f26f0c6210a274dfc351336129 Signed-off-by: Steve George --- gnu/packages/python-science.scm | 35 +++++++++++++++++++++++++++++++++ 1 file changed, 35 insertions(+) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 4f50e06762917d5a475c13643f7cacb49cda838d..6e1798f301d275465dc66ac0542dd054e275c2a4 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -1197,6 +1197,41 @@ between Snakemake and its report plugins.") its software deployment plugins.") (license license:expat))) +(define-public python-snakemake-interface-storage-plugins + (package + (name "python-snakemake-interface-storage-plugins") + (version "3.3.0") + (source + (origin + (method git-fetch) + (uri (git-reference + (url (string-append "https://github.com/snakemake/" + "snakemake-interface-storage-plugins")) + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "05n5xgwagb01nyzi8xfvp0nvdfl24lxidgksm7k86p68n1rijd5a")))) + (build-system pyproject-build-system) + (arguments + (list + #:tests? #f ;circular dependency on snakemake + #:phases + #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "python3" "tests/tests.py"))))))) + (propagated-inputs (list python-reretry python-snakemake-interface-common + python-throttler python-wrapt)) + (native-inputs (list python-poetry-core python-pytest)) + (home-page (string-append "https://github.com/snakemake/" + "snakemake-interface-storage-plugins")) + (synopsis "Interface for Snakemake storage plugins") + (description + "This package provides a stable interface for interactions between +Snakemake and its storage plugins.") + (license license:expat))) + (define-public python-tdda (package (name "python-tdda")