~ruther/guix-local

594f1a55bfbfc833d2d6ecc6b6db5b6f7dc35b41 — Simon Tournier 6 months ago 5797a07
gnu: r-dada2: Adjust GCC@14.

* gnu/packages/bioconductor.scm (r-dada2)[arguments]: Add phase that decreases
GCC@14 strictness.

Change-Id: Ie488f6f2ecffa38b1327ec5efb726c49c2c04319
1 files changed, 10 insertions(+), 0 deletions(-)

M gnu/packages/bioconductor.scm
M gnu/packages/bioconductor.scm => gnu/packages/bioconductor.scm +10 -0
@@ 28255,6 28255,16 @@ visualizing bisulfite sequencing data.")
                "0lxva0lvh3xcpkrjalkg2ps8jlzaypnsy3ibd9mk4lnjpbn5hiii"))))
    (properties `((upstream-name . "dada2")))
    (build-system r-build-system)
    (arguments
     (list
      #:phases
      #~(modify-phases %standard-phases
          (add-before 'install 'relax-gcc-14-strictness
            (lambda _
              (substitute* "src/Makevars"
                (("CXX_STD = CXX11")
                 "CXX_STD = CXX11
PKG_CXXFLAGS=-g -O2 -Wno-error=changes-meaning")))))))
    (propagated-inputs
     (list r-biocgenerics
           r-biostrings