~ruther/guix-local

58786c82df700fb1f1c30022ee6ec0b2e7516e7b — Mădălin Ionel Patrașcu 2 years ago 4c17016
gnu: Add r-rnbeads.

* gnu/packages/bioconductor.scm (r-rnbeads): New variable.

Change-Id: I78b248a449473fc37ac414295faa6e61269b8625
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
1 files changed, 36 insertions(+), 0 deletions(-)

M gnu/packages/bioconductor.scm
M gnu/packages/bioconductor.scm => gnu/packages/bioconductor.scm +36 -0
@@ 8169,6 8169,42 @@ nucleotide sequence analysis.  The package is primarily useful to developers
of other R packages who wish to make use of HTSlib.")
    (license license:lgpl2.0+)))

(define-public r-rnbeads
  (package
    (name "r-rnbeads")
    (version "2.20.0")
    (source
     (origin
       (method url-fetch)
       (uri (bioconductor-uri "RnBeads" version))
       (sha256
        (base32 "15z7l4nmpy01xm19717l27nwf3rfsn6wjv211fn2y4ls40mz75qp"))))
    (properties `((upstream-name . "RnBeads")))
    (build-system r-build-system)
    (propagated-inputs
     (list r-biocgenerics
           r-cluster
           r-ff
           r-fields
           r-genomicranges
           r-ggplot2
           r-gplots
           r-gridextra
           r-illuminaio
           r-iranges
           r-limma
           r-mass
           r-matrixstats
           r-methylumi
           r-plyr
           r-s4vectors))
    (home-page "https://bioconductor.org/packages/RnBeads")
    (synopsis "RnBeads")
    (description
     "@code{RnBeads} facilitates comprehensive analysis of various types of DNA
methylation data at the genome scale.")
    (license license:gpl3)))

(define-public r-impute
  (package
    (name "r-impute")