@@ 43,125 43,3 @@
#:use-module (gnu packages serialization)
#:use-module (gnu packages tls)
#:use-module (srfi srfi-1))
-
-(define-public irods
- (package
- (name "irods")
- (version "4.2.8")
- (source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/irods/irods/releases/download/"
- version "/irods-" version ".tar.gz"))
- (sha256
- (base32
- "0ny54c3r0j692rvbr4iibg7xgd2i7g9x8yyrw04j889bywix14rc"))))
- (build-system cmake-build-system)
- (arguments
- `(#:configure-flags
- (list
- "-DCMAKE_BUILD_TYPE=Release"
- (string-append "-DCMAKE_MODULE_LINKER_FLAGS=-Wl,-rpath="
- (assoc-ref %outputs "out") "/lib")
- (string-append "-DCMAKE_SHARED_LINKER_FLAGS=-Wl,-rpath="
- (assoc-ref %outputs "out") "/lib")
- (string-append "-DCMAKE_EXE_LINKER_FLAGS=-Wl,-rpath="
- (assoc-ref %outputs "out") "/lib")
-
- ;; Configuration aborts if no generator format is set
- "-DCPACK_GENERATOR=TGZ"
-
- ;; Configuration attempts to guess the distribution with Python.
- "-DIRODS_LINUX_DISTRIBUTION_NAME=guix"
- "-DIRODS_LINUX_DISTRIBUTION_VERSION_MAJOR=1"
-
- (string-append "-DIRODS_EXTERNALS_FULLPATH_CLANG="
- (assoc-ref %build-inputs "clang"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_CLANG_RUNTIME="
- (assoc-ref %build-inputs "clang-runtime"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_CPPZMQ="
- (assoc-ref %build-inputs "cppzmq"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_ARCHIVE="
- (assoc-ref %build-inputs "libarchive"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_AVRO="
- (assoc-ref %build-inputs "avro-cpp"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_BOOST="
- (assoc-ref %build-inputs "boost"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_ZMQ="
- (assoc-ref %build-inputs "zeromq"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_JSON="
- (assoc-ref %build-inputs "json"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_CATCH2="
- (assoc-ref %build-inputs "catch2"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_NANODBC="
- (assoc-ref %build-inputs "nanodbc"))
- (string-append "-DIRODS_EXTERNALS_FULLPATH_FMT="
- (assoc-ref %build-inputs "fmt")))
-
- #:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'unset-Werror
- (lambda _
- ;; -Werror kills the build due to a comparison REQUIRE(errs.size() == err->len);
- ;; in unit_tests/src/test_irods_lifetime_manager.cpp
- (substitute* "CMakeLists.txt"
- (("-Werror") ""))))
- (add-after 'unpack 'remove-FHS-and-prefix-assumptions
- (lambda* (#:key inputs #:allow-other-keys)
- (substitute* '("CMakeLists.txt"
- "cmake/server.cmake"
- "cmake/development_library.cmake"
- "cmake/runtime_library.cmake")
- (("usr/") ""))
- (substitute* "lib/core/src/irods_default_paths.cpp"
- (("path.append\\(\"usr\"\\)") "path")
- (("path.remove_filename\\(\\).remove_filename\\(\\).remove_filename\\(\\)")
- "path.remove_filename().remove_filename()"))
- (substitute* "scripts/irods/paths.py"
- (("'usr', 'lib', 'irods'") "'lib', 'irods'"))
- (substitute* "scripts/irods/pypyodbc.py"
- (("\"/usr/lib/libodbc.so\"")
- (search-input-file inputs "/lib/libodbc.so")))))
- (add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH
- (lambda* (#:key inputs #:allow-other-keys)
- (let ((gcc (assoc-ref inputs "gcc")))
- (setenv "CPLUS_INCLUDE_PATH"
- (string-join
- (cons* (search-input-directory inputs "/include/c++/v1")
- (search-input-directory inputs "/include/catch2")
- (search-input-directory inputs "/include/nlohmann")
- ;; Hide GCC's C++ headers so that they do not interfere with
- ;; the Clang headers.
- (delete (string-append gcc "/include/c++")
- (string-split (getenv "CPLUS_INCLUDE_PATH")
- #\:)))
- ":"))
- (format #true
- "environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%"
- (getenv "CPLUS_INCLUDE_PATH"))))))))
- (inputs
- `(("avro-cpp" ,avro-cpp-1.9-for-irods)
- ("boost" ,boost-for-irods)
- ("cppzmq" ,cppzmq)
- ("fmt" ,fmt-6)
- ("json" ,nlohmann-json)
- ("libarchive" ,libarchive)
- ("libcxxabi" ,libcxxabi-6) ; we need this for linking with -lc++abi
- ("linux-pam" ,linux-pam)
- ("mit-krb5" ,mit-krb5)
- ("nanodbc" ,nanodbc-for-irods)
- ("openssl" ,openssl)
- ("python" ,python-wrapper)
- ("unixodbc" ,unixodbc)
- ("zeromq" ,zeromq)))
- (native-inputs
- `(("catch2" ,catch2)
- ("clang" ,clang-toolchain-6)
- ("clang-runtime" ,clang-runtime-6)
- ("libcxx+libcxxabi" ,libcxx+libcxxabi-6)))
- (home-page "https://irods.org")
- (synopsis "Data management software")
- (description "The Integrated Rule-Oriented Data System (iRODS) is data
-management software. iRODS virtualizes data storage resources, so users can
-take control of their data, regardless of where and on what device the data is
-stored.")
- (license license:bsd-3)))