@@ 28740,6 28740,44 @@ rapid and on-disk conversion between h5Seurat and AnnData objects, with the
goal of enhancing interoperability between Seurat and Scanpy.")
(license license:gpl3))))
+(define-public r-seuratdata
+ (let ((commit "b59556b24d7d6728a5744c9c715dd5f7f32ed7a5")
+ (revision "1"))
+ (package
+ (name "r-seuratdata")
+ (version (git-version "0.2.1" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/satijalab/seurat-data")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1xfdmdmgn4r0z6w4cxa98ic6xk8i6qz054r215dvqbjs1vydsbf9"))))
+ (properties `((upstream-name . "SeuratData")))
+ (build-system r-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ ;; When there is no HOME directory, this package will fail to load
+ ;; the included list of packages.
+ (add-after 'unpack 'set-HOME
+ (lambda _ (setenv "HOME" "/tmp"))))))
+ (propagated-inputs
+ `(("r-cli" ,r-cli)
+ ("r-crayon" ,r-crayon)
+ ("r-rappdirs" ,r-rappdirs)))
+ (home-page "https://github.com/satijalab/seurat-data")
+ (synopsis "Install and manage Seurat datasets")
+ (description
+ "Single cell RNA sequencing datasets can be large, consisting of
+matrices that contain expression data for several thousand features across
+several thousand cells. This package is designed to easily install, manage,
+and learn about various single-cell datasets, provided Seurat objects and
+distributed as independent packages.")
+ (license license:gpl3))))
+
(define-public r-phangorn
(package
(name "r-phangorn")