~ruther/guix-local

514856e1aa7875ed3aea4c4f7d749e3dca598e0c — Vinicius Monego 3 years ago a38f5a7
gnu: Add python-arviz.

* gnu/packages/statistics.scm (python-arviz): New variable.
1 files changed, 48 insertions(+), 0 deletions(-)

M gnu/packages/statistics.scm
M gnu/packages/statistics.scm => gnu/packages/statistics.scm +48 -0
@@ 2125,6 2125,54 @@ point (up to 50% contamination) and have a number of nice applications in
machine learning, computer vision, and high-dimensional statistics.")
    (license license:asl2.0)))

(define-public python-arviz
  (package
    (name "python-arviz")
    (version "0.15.1")
    (source (origin
              (method git-fetch)        ; PyPI misses some test files
              (uri (git-reference
                    (url "https://github.com/arviz-devs/arviz")
                    (commit (string-append "v" version))))
              (file-name (git-file-name name version))
              (sha256
               (base32
                "0nqr4v927r9kc50z7rwlk2m8nw3dnnmmwmwcfijzd93gbg53wc4f"))))
    (build-system pyproject-build-system)
    (arguments
     ;; FIXME: matplotlib tests fail because of the "--save" test flag.
     (list #:test-flags #~'("--ignore"
                            "arviz/tests/base_tests/test_plots_matplotlib.py")
           #:phases
           #~(modify-phases %standard-phases
               (add-after 'unpack 'remove-radon
                 (lambda _
                   (delete-file
                    ;; This dataset is loaded remotely, it's not supposed to
                    ;; be copied locally.
                    "arviz/data/example_data/code/radon/radon.json")))
               (add-before 'check 'write-permission
                 (lambda _
                   ;; 3 tests require write permission.
                   (setenv "HOME" "/tmp"))))))
    (native-inputs (list python-cloudpickle python-pytest))
    (propagated-inputs (list python-h5netcdf
                             python-matplotlib
                             python-numpy
                             python-packaging
                             python-pandas
                             python-scipy
                             python-typing-extensions
                             python-xarray
                             python-xarray-einstats))
    (home-page "https://github.com/arviz-devs/arviz")
    (synopsis "Exploratory analysis of Bayesian models")
    (description
     "ArviZ is a Python package for exploratory analysis of Bayesian models.
It includes functions for posterior analysis, data storage, model checking,
comparison and diagnostics.")
    (license license:asl2.0)))

(define-public python-patsy
  (package
    (name "python-patsy")