From 4436b2ee8ec97359f4f259d1ec563003c7ad1448 Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <rekado@elephly.net>
Date: Tue, 11 Nov 2025 14:15:40 +0100
Subject: [PATCH] gnu: r-skitools: Disable one test.

* gnu/packages/bioinformatics.scm (r-skitools)[arguments]: Add phase
'disable-bad-test.

Change-Id: I5c79aa28e343266a83522afe6635b3a714dadcc1
---
 gnu/packages/bioinformatics.scm | 10 ++++++++++
 1 file changed, 10 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 339bee002b7fb4a4da1f6521c2678e9df753553f..d941b9cf578e8eb3e45bfebbc4fc89c8109653cc 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -13190,6 +13190,16 @@ GenomicRanges operations.")
                   "1977d9bkdk9l2n6niahfj9vksh9l1ga4g7c3b3x27lj1gc0qgr4z"))))
       (properties `((upstream-name . "skitools")))
       (build-system r-build-system)
+      (arguments
+       (list
+        #:phases
+        '(modify-phases %standard-phases
+           (add-after 'unpack 'disable-bad-test
+             (lambda _
+               ;; See https://github.com/mskilab-org/skitools/issues/11
+               (substitute* "tests/testthat/test_skitools.R"
+                 ((".*test ra.merge.*" m)
+                  (string-append m "skip('guix')\n"))))))))
       (propagated-inputs
        (list r-biostrings
              r-complexheatmap