~ruther/guix-local

3f241ee93925a2dd945cdf016a92602aa7f237d0 — Sharlatan Hellseher 3 months ago bcf332f 
gnu: python-spectral-cube: Update to 0.6.7.

* gnu/packages/astronomy.scm (python-spectral-cube): Update to 0.6.7.
[arguments] <tests?, test-flags>: Enable, skip 5 tests.
[propagated-inputs]: Remove python-aplpy, python-distributed,
python-fsspec, python-matplotlib, python-pvextractor-bootstrap, and
python-reproject.
[native-inputs]: Remove python-wheel; add python-pytest,
python-pytest-astropy, python-pytest-xdist, and python-setuptools.

Change-Id: Ib34388a456f50d4296218c521e0a2af34a395362
Signed-off-by: Rutherther <rutherther@ditigal.xyz>
patch browse .tar.gz 
1 files changed, 24 insertions(+), 17 deletions(-)

M gnu/packages/astronomy.scm

M gnu/packages/astronomy.scm => gnu/packages/astronomy.scm +24 -17
@@ 9121,41 9121,48 @@ instruments.")
(define-public python-spectral-cube
  (package
    (name "python-spectral-cube")
    (version "0.6.6")
    (version "0.6.7")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "spectral_cube" version))
       (sha256
        (base32 "0hz2pxc7fnxd1xr1n74ljjc84j25plnclp3y6jwg1banps360c3f"))))
        (base32 "1r3mwrnjw2yfjsd3bskl013c3yk0ad3ky1yhxlvyiz4phrahhb3f"))))
    (build-system pyproject-build-system)
    (arguments
     (list
      ;; See <https://github.com/radio-astro-tools/radio-beam/issues/129>.
      #:tests? #f
      ;; tests: 1520 passed, 185 skipped, 17 xfailed, 6048 warnings
      #:test-flags
      #~(list "--numprocesses" (number->string (parallel-job-count)))))
      #~(list "--numprocesses" (number->string (min 8 (parallel-job-count)))
              ;; AttributeError: module 'numpy' has no attribute 'product'
              #$@(map (lambda (test) (string-append "--deselect="
                                                    "spectral_cube/tests/"
                                                    "test_casafuncs.py::"
                                                    "test"))
                      (list "test_casa_read_basic[False-False]"
                            "test_casa_read_basic[False-True]"
                            "test_casa_read_basic[True-False]"
                            "test_casa_read_basic[True-True]"
                            "test_casa_read_basic_nomask")))))
    (native-inputs
     (list python-pytest
           python-pytest-astropy
           python-pytest-xdist
           python-regions
           python-setuptools
           python-setuptools-scm))
    (propagated-inputs
     (list python-aplpy
           python-astropy
     (list python-astropy
           python-casa-formats-io
           python-dask
           python-distributed
           python-fsspec
           python-joblib
           python-matplotlib
           python-numpy
           python-packaging
           python-pvextractor-bootstrap
           python-radio-beam
           python-reproject
           python-scipy
           python-tqdm
           ;; [optional]
           python-scipy
           python-zarr))
    (native-inputs
     (list python-regions
           python-setuptools-scm
           python-wheel))
    (home-page "https://spectral-cube.readthedocs.io/en/latest/")
    (synopsis "Library for reading and analyzing astrophysical spectral data cubes")
    (description