20 files changed, 215 insertions(+), 74 deletions(-)

M gnu/packages/bioinformatics.scm
M gnu/packages/databases.scm
M gnu/packages/django.scm
M gnu/packages/graphviz.scm
M gnu/packages/jupyter.scm
M gnu/packages/machine-learning.scm
M gnu/packages/music.scm
M gnu/packages/package-management.scm
M gnu/packages/python-check.scm
M gnu/packages/python-science.scm
M gnu/packages/python-web.scm
M gnu/packages/python-xyz.scm
M gnu/packages/simulation.scm
M gnu/packages/sphinx.scm
M gnu/packages/syndication.scm
M gnu/packages/terminals.scm
M gnu/packages/time.scm
M gnu/packages/version-control.scm
M gnu/packages/virtualization.scm
M gnu/packages/xorg.scm

@@ 3285,8 3285,14 @@ the managed genomes, STAR indexing and mapping and more.")
                (("==") ">=")))))))
     (propagated-inputs (list python-htsget python-psutil python-requests
                              python-tqdm python-urllib3))
-    (native-inputs (list python-coverage python-pytest python-pyfakefs
-                         python-responses python-mock))
+    (native-inputs
+     (list python-coverage
+           python-mock
+           python-pyfakefs
+           python-pytest
+           python-responses
+           python-setuptools
+           python-wheel))
     (home-page "https://github.com/EGA-archive/ega-download-client")
     (synopsis "EGA download client")
     (description "PyEGA3 is a tool for viewing and downloading files from

@@ 5713,6 5713,7 @@ mechanism of @code{dogpile}.")
      (list python-beautifulsoup4
            python-black
            python-cogapp
+           python-pip
            python-pytest
            python-pytest-asyncio
            python-pytest-runner

@@ 299,6 299,8 @@ commands, additional database fields and admin extensions.")
               (if tests?
                   (apply invoke "python" "-m" "django" "test" test-flags)
                   (format #t "test suite not run~%")))))))
+    (native-inputs
+     (list python-setuptools python-wheel))
     (propagated-inputs
      (list python-django python-stdnum))
     (home-page "https://django-localflavor.readthedocs.io/en/latest/")

@@ 221,7 221,9 @@ and not test_sphinx_book_text_broken_strict")))
            python-isort
            python-mypy
            python-pytest
-           python-pytest-cov))
+           python-pytest-cov
+           python-setuptools
+           python-wheel))
     (propagated-inputs
      (list python-black python-sphinx-5 python-unidecode
            (package/inherit python-sphinx-rtd-theme

@@ 436,7 436,8 @@ the JupyterLab CSS variables.")
            python-requests-mock
            python-ruamel.yaml
            python-strict-rfc3339
-           python-werkzeug))
+           python-werkzeug
+           python-wheel))
     (home-page "https://jupyter.org")
     (synopsis "Server components for JupyterLab applications")
     (description "JupyterLab Server sits between JupyterLab and Jupyter


@@ 878,7 879,9 @@ nbshow present a single notebook in a terminal-friendly way
      (list python-pytest
            python-pytest-cram
            python-pytest-flake8
-           python-pytest-runner))
+           python-pytest-runner
+           python-setuptools
+           python-wheel))
     (home-page "https://github.com/kynan/nbstripout")
     (synopsis "Strips outputs from Jupyter and IPython notebooks")
     (description

@@ 5121,7 5121,8 @@ Actions for the Lightning suite of libraries.")
                          python-parameterized
                          python-pytest
                          python-pytest-cov
-                         python-scikit-learn))
+                         python-scikit-learn
+                         python-setuptools))
     (home-page "https://captum.ai")
     (synopsis "Model interpretability for PyTorch")
     (description "Captum is a model interpretability and understanding library


@@ 5692,6 5693,7 @@ inference.")
     (native-inputs (list python-flake8
                          python-flake8-print
                          python-pytest
+                         python-setuptools
                          python-setuptools-scm
                          python-twine))
     (home-page "https://github.com/cornellius-gp/linear_operator/")


@@ 5724,6 5726,7 @@ linear algebra routines needed for structured matrices (or operators).")
                          python-flake8-print
                          python-nbval
                          python-pytest
+                         python-setuptools
                          python-twine))
     (home-page "https://gpytorch.ai")
     (synopsis "Implementation of Gaussian Processes in PyTorch")

@@ 1811,7 1811,7 @@ listeners answer questions about music quickly and simply.")
     (inputs
      (list lilypond))
     (native-inputs
-     (list python-pytest))
+     (list python-pytest python-setuptools python-wheel))
     (propagated-inputs
      (list python-quicktions
            python-ply


@@ 1843,7 1843,7 @@ typographic detail of symbols on the page.")
         (base32 "1y8s55b4mlsigm0xkk6qjpp08c75rv0swvjp0lj3cs6lgqdjxdjl"))))
     (build-system pyproject-build-system)
     (native-inputs
-     (list lilypond python-pytest))
+     (list lilypond python-pytest python-setuptools python-wheel))
     (propagated-inputs
      (list abjad))
     (home-page "https://abjad.github.io")


@@ 1868,7 1868,7 @@ and manipulating rhythms such as accelerandi, taleas, and more.")
         (base32 "0j4pf4h27jm3df0dn2rwkdx6zqcxvr7pqchbaa9rffz7q4hbakmf"))))
     (build-system pyproject-build-system)
     (native-inputs
-     (list lilypond python-pytest))
+     (list lilypond python-pytest python-setuptools python-wheel))
     (propagated-inputs
      (list abjad))
     (home-page "https://abjad.github.io")


@@ 4074,7 4074,11 @@ formats, looking up tracks through metadata and audio fingerprints.")
                  (("( +)@given" all spaces)
                   (string-append spaces "@settings(deadline=None)\n" all))))))))
     (native-inputs
-     (list python-pytest python-hypothesis python-flake8))
+     (list python-flake8
+           python-hypothesis
+           python-pytest
+           python-setuptools
+           python-wheel))
     (home-page "https://mutagen.readthedocs.io/")
     (synopsis "Read and write audio tags")
     (description "Mutagen is a Python module to handle audio metadata.  It

@@ 1139,8 1139,13 @@ environments.")
     (inputs
      (list libarchive))
     (native-inputs
-     (list python-cython python-pytest python-pytest-cov
-           python-pytest-mock python-mock))
+     (list python-cython
+           python-mock
+           python-pytest
+           python-pytest-cov
+           python-pytest-mock
+           python-setuptools
+           python-wheel))
     (home-page "https://conda.io")
     (synopsis "Create and extract conda packages of various formats")
     (description


@@ 1280,7 1285,8 @@ extracting, creating, and converting between formats.")
      (list python-coverage
            python-flaky
            python-pytest-timeout
-           python-pytest-xprocess))
+           python-pytest-xprocess
+           python-wheel))
     (home-page "https://github.com/conda/conda")
     (synopsis "Cross-platform, OS-agnostic, system-level binary package manager")
     (description

@@ 467,7 467,9 @@ result documents that can be read by tools such as Jenkins or Bamboo.")
            python-greenlet
            python-pytest
            python-pytest-asyncio
-           python-pytest-trio))
+           python-pytest-trio
+           python-setuptools
+           python-wheel))
     (home-page "https://github.com/joerick/pyinstrument")
     (synopsis "Call stack profiler for Python")
     (description


@@ 1299,7 1301,11 @@ simpler.")
         (base32 "01qhbkb3n8c5c4id94w6b06q9wb7b6a33mqwyrkdfzk5pzv1gcyd"))))
     (build-system pyproject-build-system)
     (arguments (list #:tests? #false)) ;there are none
-    (native-inputs (list python-coverage python-pytest))
+    (native-inputs
+     (list python-coverage
+           python-pytest
+           python-setuptools
+           python-wheel))
     (home-page "https://github.com/tarpas/pytest-testmon")
     (synopsis "Selects tests affected by changed files and methods")
     (description


@@ 1328,7 1334,11 @@ simpler.")
                            ;; No keyboard interrupt in our build environment.
                            " and not test_actual_test"))))
     (native-inputs
-     (list python-hypothesis python-pytest python-pytest-cov))
+     (list python-hypothesis
+           python-pytest
+           python-pytest-cov
+           python-setuptools
+           python-wheel))
     (propagated-inputs
       (list python-async-generator python-outcome python-pytest python-trio))
     (home-page "https://github.com/python-trio/pytest-trio")


@@ 1617,7 1627,11 @@ service processes for your tests with pytest.")
                 (substitute* "setup.cfg"
                   ((".*timeout.*") ""))))))))
     (native-inputs
-     (list python-pydantic python-pytest python-pytest-isort))
+     (list python-pydantic
+           python-pytest
+           python-pytest-isort
+           python-setuptools
+           python-wheel))
     (home-page "https://github.com/samuelcolvin/pytest-toolbox")
     (synopsis "Numerous useful plugins for Pytest")
     (description


@@ 1708,7 1722,9 @@ notebooks.")
     (native-inputs
      (list python-pytest
            python-pytest-cov
-           python-sympy))
+           python-setuptools
+           python-sympy
+           python-wheel))
     (propagated-inputs
      (list python-coverage
            python-ipykernel


@@ 2229,6 2245,7 @@ them using any Python VM with basically no runtime overhead.")
     (native-inputs
      (list python-beartype
            python-mypy
+           python-setuptools
            python-typeguard
            python-wheel))
     (propagated-inputs (list python-numpy python-typing-extensions))

@@ 2467,7 2467,9 @@ parentdir_prefix = dask_expr-
      ;; package without creating a mutually recursive dependency.
      (list python-dask/bootstrap
            python-pytest
-           python-versioneer))
+           python-setuptools
+           python-versioneer
+           python-wheel))
     (home-page "https://github.com/dask/dask-expr")
     (synopsis "Dask DataFrames with query optimization")
     (description "This is a rewrite of Dask DataFrame that includes query

@@ 706,7 706,9 @@ comes with a SOCKS proxy client.")
      (list python-pytest
            python-pytest-asyncio
            python-pytest-cov
-           python-pytest-runner))
+           python-pytest-runner
+           python-setuptools
+           python-wheel))
     (home-page "https://github.com/vxgmichel/aiostream")
     (synopsis "Generator-based operators for asynchronous iteration")
     (description "@code{aiostream} provides a collection of stream operators that can


@@ 1038,7 1040,12 @@ to the OVHcloud APIs.")
        (sha256
         (base32 "15y78xcc3zkmvj1mdzz8gyhf3apbl91073kwhzbjk5abc1civwlw"))))
     (build-system pyproject-build-system)
-    (native-inputs (list python-pytest python-pytest-cov python-setuptools-scm))
+    (native-inputs
+     (list python-pytest
+           python-pytest-cov
+           python-setuptools
+           python-setuptools-scm
+           python-wheel))
     (home-page "https://github.com/agronholm/cbor2")
     (synopsis "Concise Binary Object Representation (CBOR) (de)serializer")
     (description "This Python library provides encoding and decoding for the


@@ 1447,7 1454,9 @@ HTTP servers, RESTful APIs, and web services.")
                          python-pytest-cov
                          python-pytest-localserver
                          python-pytest-socket
-                         python-setuptools-scm))
+                         python-setuptools
+                         python-setuptools-scm
+                         python-wheel))
     (home-page "https://parfive.readthedocs.io/")
     (synopsis "HTTP and FTP parallel file downloader")
     (description


@@ 1634,7 1643,9 @@ object graph to and from JSON.")
            python-pytest-httpbin
            python-pytest-mock
            python-pytest-runner
-           python-requests-mock))
+           python-requests-mock
+           python-setuptools
+           python-wheel))
     (home-page "https://mechanicalsoup.readthedocs.io/")
     (synopsis "Python library for automating website interaction")
     (description


@@ 3924,9 3935,14 @@ adapter for use with the Requests library.")
                (base32
                 "0w621mg956m9rn7v39jpwi4gpnpl90pprwl29cp640dahqqv38ms"))))
     (build-system pyproject-build-system)
-    (native-inputs (list python-async-timeout python-pytest
-                         python-pytest-asyncio python-pytest-cov
-                         python-trustme))
+    (native-inputs
+     (list python-async-timeout
+           python-pytest
+           python-pytest-asyncio
+           python-pytest-cov
+           python-setuptools
+           python-trustme
+           python-wheel))
     (propagated-inputs (list python-siosocks))
     (home-page "https://aioftp.readthedocs.io/")
     (synopsis "FTP client/server for asyncio in Python")


@@ 6222,8 6238,12 @@ the non-map-specific features.  It can be used to generate HTML + JS.")
      (list #:test-flags
            '(list "-k" "not test_speedups")))
     (native-inputs
-     (list python-pytest-cov python-pytest-flake8 python-pytest-isort
-           python-pytest-runner))
+     (list python-pytest-cov
+           python-pytest-flake8
+           python-pytest-isort
+           python-pytest-runner
+           python-setuptools
+           python-wheel))
     (home-page "https://tinycss.readthedocs.io/")
     (synopsis "Complete yet simple CSS parser for Python")
     (description


@@ 6443,6 6463,7 @@ event loop.  It is implemented in Cython and uses libuv under the hood.")
            python-pytest-cov
            python-sphinx
            texinfo))
+    (propagated-inputs (list python-packaging python-setuptools python-wheel))
     (home-page "https://gunicorn.org/")
     (synopsis "Python WSGI HTTP Server for UNIX")
     (description "Gunicorn ‘Green Unicorn’ is a Python WSGI HTTP


@@ 7254,8 7275,13 @@ according to the standard set by PasteDeploy")
     (build-system python-build-system)
     (arguments '(#:test-target "pytest"))
     (native-inputs
-     (list python-pytest python-pytest-runner python-watchdog python-mock
-           python-pytest-cov))
+     (list python-mock
+           python-pytest
+           python-pytest-cov
+           python-pytest-runner
+           python-setuptools
+           python-watchdog
+           python-wheel))
     (propagated-inputs
      (list python-pytz))
     (home-page "https://readthedocs.org/projects/hupper")


@@ 8046,11 8072,13 @@ applications.")
            python-pytest-benchmark
            python-pytest-sanic
            python-sanic-testing
+           python-setuptools
            python-slotscheck
            python-towncrier
            python-tox
            python-types-ujson
-           python-uvicorn))
+           python-uvicorn
+           python-wheel))
     (home-page "https://github.com/sanic-org/sanic/")
     (synopsis "Async Python web server/framework")
     (description

@@ 342,6 342,7 @@
                          python-pytest-cov
                          python-pytest-mock
                          python-pytest-xdist
+                         python-setuptools
                          python-wheel))
     (home-page "https://github.com/caronc/apprise")
     (synopsis


@@ 572,8 573,10 @@ design}.")
            python-isort
            python-ipython-genutils
            python-jupyter-server
+           python-pyaml
            python-pytest
-           python-pyaml))
+           python-setuptools
+           python-wheel))
     (propagated-inputs
      (list python-markdown-it-py
            python-mdit-py-plugins


@@ 6251,6 6254,7 @@ Capabilities include:
               (base32
                "1x620s4dk4d501pivhlfzbi2d1r5fnm9cssqwkn76f7d8sfk9nyg"))))
     (build-system pyproject-build-system)
+    (native-inputs (list python-setuptools python-wheel))
     (home-page "https://pypi.org/project/Unidecode/")
     (synopsis "ASCII transliterations of Unicode text")
     (description


@@ 8570,7 8574,11 @@ and integrated feature-set for programming Python effectively.")
            python-typed-ast
            python-typing-extensions))
     (native-inputs
-     (list python-pytest python-pytest-aiohttp python-setuptools-scm))
+     (list python-pytest
+           python-pytest-aiohttp
+           python-setuptools
+           python-setuptools-scm
+           python-wheel))
     (home-page "https://github.com/psf/black")
     (synopsis "The uncompromising code formatter")
     (description "Black is the uncompromising Python code formatter.")


@@ 9073,8 9081,12 @@ objects.")
     (propagated-inputs
      (list python-numba python-numpy python-scipy))
     (native-inputs
-     (list python-dask python-importlib-metadata python-pytest
-           python-pytest-black python-pytest-cov))
+     (list python-dask
+           python-importlib-metadata
+           python-pytest
+           python-pytest-black
+           python-pytest-cov
+           python-setuptools))
     (home-page "https://github.com/pydata/sparse/")
     (synopsis "Library for multi-dimensional sparse arrays")
     (description


@@ 9476,7 9488,12 @@ parse and apply unified diffs.  It has features such as:
                   ;; TODO: unclear why these fail.
                   "-k" "not test_MyClass and not test_my_function")))
     (propagated-inputs (list python-jinja2 python-sphinx))
-    (native-inputs (list python-matplotlib python-pytest python-pytest-cov))
+    (native-inputs
+     (list python-matplotlib
+           python-pytest
+           python-pytest-cov
+           python-setuptools
+           python-wheel))
     (home-page "https://pypi.org/project/numpydoc/")
     (synopsis "Numpy's Sphinx extensions")
     (description "Sphinx extension to support docstrings in Numpy format.")


@@ 10229,7 10246,7 @@ e.g. copy examples, fetch data, etc.")
          "1kjrxav572j45xvr1iy60zb2g8zqvrinzdkl4ax36js4vczckl8d"))))
     (build-system pyproject-build-system)
     (native-inputs
-     (list python-pytest python-pytest-cov))
+     (list python-pytest python-pytest-cov python-setuptools python-wheel))
     (home-page "https://github.com/aio-libs/multidict/")
     (synopsis "Multidict implementation")
     (description "Multidict is dict-like collection of key-value pairs


@@ 10250,7 10267,7 @@ where key might be occurred more than once in the container.")
     (propagated-inputs
      (list python-six))
     (native-inputs
-     (list python-flake8 python-pycodestyle))
+     (list python-flake8 python-pycodestyle python-setuptools python-wheel))
     (home-page "https://github.com/gruns/orderedmultidict")
     (synopsis "Python Ordered Multivalue Dictionary - omdict")
     (description "This package contains a library for ordered multivalue


@@ 12112,6 12129,7 @@ enforced method signatures and consistent documentation.")
            python-pytest-cov
            python-pytest-flake8
            python-pytest-mypy
+           python-setuptools
            python-setuptools-scm
            python-wheel))
     (propagated-inputs (list python-more-itertools))


@@ 15624,7 15642,7 @@ pseudo terminal (pty), and interact with both the process and its pty.")
              (invoke "make" "test"))))))
     (build-system python-build-system)
     (native-inputs
-     (list python-coverage which))
+     (list python-coverage python-setuptools python-wheel which))
     (synopsis "Simple testing framework for command line applications")
     (description
      "Cram is a functional testing framework for command line applications.


@@ 16386,8 16404,9 @@ distribution.  It is not intended as an end-user tool.")
        (uri (pypi-uri "immutables" version))
        (sha256
         (base32 "1x4cinh0xbl6p6p2yfm2s07mxxy3lf0zzai9gqpydk4482bwfdjk"))))
-    (build-system python-build-system)
-    (native-inputs (list python-mypy python-pytest))
+    (build-system pyproject-build-system)
+    (native-inputs
+     (list python-mypy python-pytest python-setuptools python-wheel))
     (home-page "https://github.com/MagicStack/immutables")
     (synopsis "High-performance immutable mapping type for Python")
     (description


@@ 18079,6 18098,7 @@ time.")
            texlive-collection-basic
            texlive-enumitem
            texlive-environ
+           texlive-etoolbox
            texlive-eurosym
            texlive-etoolbox
            texlive-fancyvrb


@@ 18089,7 18109,6 @@ time.")
            texlive-hyperref
            texlive-infwarerr
            texlive-jknapltx
-           texlive-jknapltx
            texlive-kvoptions
            texlive-lm
            texlive-lm-math


@@ 24970,6 24989,7 @@ package attempts to address the shortcomings of @code{isodate}.")
            python-hypothesmith
            python-libcst-minimal
            python-natsort
+           python-pip
            python-poetry-core
            python-pylama
            python-pypa-build


@@ 27750,6 27770,7 @@ submitting it.")
        (sha256
         (base32 "0ymdwrx544a6gn6wm9dixpgzbfrbpxvcj5ys7m41cgb4lvpvx691"))))
     (build-system pyproject-build-system)
+    (native-inputs (list python-setuptools python-wheel))
     (home-page "https://github.com/iwalton3/python-mpv-jsonipc")
     (synopsis "Python API to control MPV using JSON IPC")
     (description "Python MPV JSONIPC implements an interface similar to


@@ 28375,7 28396,7 @@ library to allow local file system access via @code{file://} URLs.")
              (when tests?
                (invoke "pytest" "-vv")))))))
     (native-inputs
-     (list python-coverage python-pytest))
+     (list python-coverage python-pytest python-setuptools python-wheel))
     (propagated-inputs
      (list python-editdistance))
     (home-page "https://github.com/chriskuehl/identify")


@@ 28474,7 28495,11 @@ effort to simplify the man pages with practical examples.")
              ;; This test fails. It tries to open a network socket.
              (invoke "pytest" "-vv" "-k" "not test_smoke"))))))
     (native-inputs
-     (list python-coverage python-mock python-pytest))
+     (list python-coverage
+           python-mock
+           python-pytest
+           python-setuptools
+           python-wheel))
     (home-page "https://ekalinin.github.io/nodeenv/")
     (synopsis "Create isolated node.js environments")
     (description


@@ 28582,7 28607,7 @@ Let's Encrypt.")
              (when tests?
                (invoke "pytest" "-vv")))))))
     (native-inputs
-     (list python-pytest))
+     (list python-pytest python-setuptools python-wheel))
     (home-page "https://github.com/asottile/cfgv")
     (synopsis "Configuration validation library")
     (description


@@ 28821,7 28846,8 @@ codecs for use in data storage and communication applications.")
            python-pytest-doctestplus
            python-pytest-timeout
            python-pytest-xdist
-           python-setuptools-scm))
+           python-setuptools-scm
+           python-wheel))
     (home-page "https://github.com/zarr-developers/zarr-python")
     (synopsis "Chunked, compressed, N-dimensional arrays for Python")
     (description


@@ 29255,7 29281,7 @@ they use the same path.")
     (build-system pyproject-build-system)
     (propagated-inputs
      (list python-locket python-numpy python-pandas python-pyzmq python-toolz))
-    (native-inputs (list python-setuptools))
+    (native-inputs (list python-setuptools python-wheel))
     (home-page "https://github.com/dask/partd/")
     (synopsis "Appendable key-value storage")
     (description "Partd stores key-value pairs.  Values are raw bytes.  We


@@ 29405,7 29431,8 @@ parentdir_prefix = dask-
            python-pytest-rerunfailures
            python-pytest-runner
            python-pytest-xdist
-           python-versioneer))
+           python-versioneer
+           python-wheel))
     (home-page "https://github.com/dask/dask/")
     (synopsis "Parallel computing with task scheduling")
     (description


@@ 29981,7 30008,7 @@ the Trio framework}.")
           "006vpl19bffy9fn0sssxbfakcvgrx7fhvy6l515fzln7vwpqf7zf"))))
     (build-system pyproject-build-system)
     (native-inputs
-     (list python-freezegun python-pytest))
+     (list python-freezegun python-pytest python-setuptools python-wheel))
     (home-page "https://github.com/jmoiron/humanize")
     (synopsis "Print numerical information in a human-readable form")
     (description "This package provides a Python module that displays numbers


@@ 30535,7 30562,11 @@ information in various formats.")
      (list python-cairocffi python-cssselect2 python-defusedxml
            python-pillow python-tinycss2))
     (native-inputs
-     (list python-pytest-flake8 python-pytest-isort python-pytest-runner))
+     (list python-pytest-flake8
+           python-pytest-isort
+           python-pytest-runner
+           python-setuptools
+           python-wheel))
     (home-page "https://cairosvg.org/")
     (synopsis "SVG to PDF/PS/PNG converter based on Cairo")
     (description "CairoSVG is a SVG converter based on Cairo.  It can export


@@ 32652,7 32683,9 @@ and not test_transcript")))
            python-pytest
            python-pytest-cov
            python-pytest-mock
-           python-setuptools-scm))
+           python-setuptools
+           python-setuptools-scm
+           python-wheel))
     (home-page "https://github.com/python-cmd2/cmd2")
     (synopsis "Tool for building interactive command line applications")
     (description


@@ 35474,7 35507,7 @@ functions defined in POSIX.1-2001 and POSIX.1-2008.")
                                 "python-pyan3-fix-absolute-path-bug.patch"))))
     (build-system pyproject-build-system)
     (native-inputs
-     (list python-pytest python-pytest-cov python-wheel))
+     (list python-pytest python-pytest-cov python-setuptools python-wheel))
     (propagated-inputs
      (list python-jinja2))
     (home-page "https://github.com/Technologicat/pyan")


@@ 37025,7 37058,13 @@ writing STL files.  It supports both the text and binary forms of STL.")
                 "0hzshd665rl1bkwvaj9va4j3gs8nmb478fbvligx20663xhmzfzp"))))
     (build-system python-build-system)
     (propagated-inputs (list python-six))
-    (native-inputs (list python-pyyaml python-mock python-pytest-cov))
+    (native-inputs
+     (list python-mock
+           python-pytest
+           python-pytest-cov
+           python-pyyaml
+           python-setuptools
+           python-wheel))
     (arguments
      `(#:phases (modify-phases %standard-phases
                   ;; There is a bug in the test_suit specification.


@@ 37113,6 37152,7 @@ adapted from the @code{packaging} package.")
             python-pytest
             python-pytest-cov
             python-pytest-timeout
+            python-setuptools
             python-setuptools-scm
             python-wheel))
     (home-page "https://github.com/iterative/shtab")

@@ 569,7 569,7 @@ some support for generating and analysing traffic scenarios..")
     (inputs
      (list openmpi python-numpy))
     (native-inputs
-     (list python-pytest-cov))
+     (list python-pytest python-setuptools python-wheel))
     (propagated-inputs
      (list python-mpi4py))
     (arguments

@@ 1173,9 1173,11 @@ enabled web server.")
     (native-inputs
      (list python-nptyping
            python-pytest
+           python-setuptools
            python-setuptools-scm
            python-sphobjinv
-           python-typing-extensions))
+           python-typing-extensions
+           python-wheel))
     (home-page "https://pypi.org/project/sphinx-autodoc-typehints/")
     (synopsis "Type hints for the Sphinx autodoc extension")
     (description "This extension allows you to use Python 3 annotations for

@@ 527,7 527,9 @@ a simple interface that makes it easy to organize and browse feeds.")
            python-mock
            python-pylint
            python-pytest
-           python-vcrpy))
+           python-setuptools
+           python-vcrpy
+           python-wheel))
     (home-page "https://gitlab.com/ajak/tuir")
     (synopsis "Terminal viewer for Reddit (Terminal UI for Reddit)")
     (description

@@ 1205,8 1205,14 @@ per-line fullscreen terminal rendering, and keyboard input event reporting.")
     (build-system pyproject-build-system)
     (propagated-inputs (list python-colorama python-log-symbols python-six
                              python-spinners python-termcolor))
-    (native-inputs (list python-coverage python-nose python-pylint python-tox
-                         python-twine))
+    (native-inputs
+     (list python-coverage
+           python-nose
+           python-pylint
+           python-setuptools
+           python-tox
+           python-twine
+           python-wheel))
     (home-page "https://github.com/manrajgrover/halo")
     (synopsis "Python library to display graphical spinners in the terminal")
     (description "Halo is a Python library to display graphical spinners in

@@ 257,7 257,11 @@ Pendulum instances.")
                      ;; XXX: Fails to get timezone from /etc/localtime.
                      "--ignore=dateutil/test/test_tz.py")))
     (native-inputs
-     (list python-pytest python-pytest-cov python-setuptools-scm))
+     (list python-pytest
+           python-pytest-cov
+           python-setuptools
+           python-setuptools-scm
+           python-wheel))
     (propagated-inputs
      (list python-six))
     (home-page "https://dateutil.readthedocs.io/en/stable/")


@@ 513,13 517,14 @@ timestamps.")
                           ;; Remove when python-dateutil > 2.8.1.
                           "-k" "not test_parse_tz_name_zzz")))
     (native-inputs
-     (list ;; For testing
-           python-chai
+     (list python-chai
            python-pytest
            python-pytest-cov
            python-pytest-mock
            python-pytz
-           python-simplejson))
+           python-setuptools
+           python-simplejson
+           python-wheel))
     (propagated-inputs
      (list python-dateutil))
     (home-page "https://github.com/arrow-py/arrow")

@@ 2315,14 2315,16 @@ visualize your public Git repositories on a web interface.")
                         " and not test_healthy_venv_creator"
                         " and not test_r_hook and not test_r_inline"))))))))
     (native-inputs
-     `(("git" ,git-minimal/pinned)
-       ("python-covdefaults" ,python-covdefaults)
-       ("python-coverage" ,python-coverage)
-       ("python-distlib" ,python-distlib)
-       ("python-pytest" ,python-pytest)
-       ("python-pytest-env" ,python-pytest-env)
-       ("python-re-assert" ,python-re-assert)
-       ("which" ,which)))
+     (list git-minimal
+           python-covdefaults
+           python-coverage
+           python-distlib
+           python-pytest
+           python-pytest-env
+           python-re-assert
+           python-setuptools
+           python-wheel
+           which))
     ;; Propagate because pre-commit is also used as a module.
     (propagated-inputs
      (list python-cfgv

@@ 2099,10 2099,12 @@ mainly implemented in user space.")
                   (format #t "test suite not run~%")))))))
     (native-inputs
      (list python-avocado-framework
-           python-setuptools-scm
            python-flake8
            python-isort
-           python-pylint))
+           python-pylint
+           python-setuptools
+           python-setuptools-scm
+           python-wheel))
     (propagated-inputs
      (list python-pygments
            python-urwid


@@ 2857,7 2859,9 @@ use with virtualization provisioning tools")
      (list python-black
            python-mypy
            python-pyhamcrest
-           python-twine))
+           python-setuptools
+           python-twine
+           python-wheel))
     (propagated-inputs
      (list python-beautifultable
            python-click

@@ 111,6 111,7 @@
   #:use-module (gnu packages perl-check)
   #:use-module (gnu packages pkg-config)
   #:use-module (gnu packages python)
+  #:use-module (gnu packages python-build)
   #:use-module (gnu packages python-compression)
   #:use-module (gnu packages python-crypto)
   #:use-module (gnu packages python-xyz)


@@ 1760,7 1761,12 @@ generate code for the @code{python-xcbffib} package.")
     (source (package-source xcffibgen))
     (build-system pyproject-build-system)
     (native-inputs
-     (list pkg-config which xcb-proto xcffibgen))
+     (list pkg-config
+           python-setuptools
+           python-wheel
+           which
+           xcb-proto
+           xcffibgen))
     (inputs
      (list libxcb))
     (propagated-inputs